BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZH09RM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1791 1057 0.0 >3x_Contig1791 Length = 39945 Score = 1057 bits (533), Expect = 0.0 Identities = 654/685 (95%), Gaps = 8/685 (1%) Strand = Plus / Minus Query: 44 gcttcaagagtttaacgtatatatcttgtctttcgttttgatatgagaccatttctattc 103 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 20131 gcttcaagagtttaacgtatatatcaagtctttcgttttgatatgagaccatttctattc 20072 Query: 104 tttttattataccattgacatgatcgattaagtttgatctagtctttgttgataagggta 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20071 tttttattataccattgacatgatcgattaagtttgatctagtctttgttgataagggta 20012 Query: 164 ccgtgtcaaggtatatgttaagctgtgagtgtagcgaataccatttcgacatattttgtt 223 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 20011 ccgtgtcaaggtatatgttaagctgtgagtgtagcgaataccatttcgacatattctgtt 19952 Query: 224 catggttacttttcagctttagtattttatcttctactgatgtccttctttgtaccacaa 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951 catggttacttttcagctttagtattttatcttctactgatgtccttctttgtaccacaa 19892 Query: 284 atgtattacgcagtccggcgatttctatttcacatccatcgatgctgccggagaaataaa 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19891 atgtattacgcagtccggcgatttctatttcacatccatcgatgctgccggagaaataaa 19832 Query: 344 tagagtttttccaggctaatgcctctgttctattncctaaacattatatcacgtttttgg 403 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 19831 tagagtttttccaggctaatgcctctgttctatt-cctaaacattatatcacgtttttgg 19773 Query: 404 ctttgattcacaatggataaaacattgnggtcagtattcttgttttccgttaagaatagg 463 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19772 ctttgattcacaatggataaaacattggggtcagtattcttgttttccgttaagaatagg 19713 Query: 464 ttgttacaatattccatttcgtacagcgaagatagcggntgagat-aatcactaatgtaa 522 |||||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||||| Sbjct: 19712 ttgttacaatattccatttcgtacagcgaagaaagcggttgagataaatcaataatgtaa 19653 Query: 523 tgtgaagtcttagttaattcatctagtncgatctttggatccagcccggacatgctatca 582 | ||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 19652 tttgaggtcttagttaattcatctagttcgatctttggatccagccaggacatgctatca 19593 Query: 583 aag-aaaataggaaggaatgta-tcaatatcgcaaacttattctttcattgatccttta- 639 ||| |||||||||||||| ||| ||||||||||||||||| |||| || |||| ||||| Sbjct: 19592 aagaaaaataggaaggaa-gtagtcaatatcgcaaacttagtcttccaatgattctttac 19534 Query: 640 cacattttctacaaaagag-acttttttgnactgactttcattttctatttcccccattt 698 ||||||| |||||| |||| ||||| ||| ||||||||||| |||||||||||||||| | Sbjct: 19533 cacatttcctacaagagagaactttcttgtactgactttca-tttctatttcccccatct 19475 Query: 699 taattactttcaaattccccgtttg 723 ||| ||||||||||| |||| |||| Sbjct: 19474 taagtactttcaaataccccttttg 19450 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,013 Number of Sequences: 1807 Number of extensions: 14013 Number of successful extensions: 90 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)