BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC41ZH10RM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig869 1332 0.0 >3x_Contig869 Length = 2873 Score = 1332 bits (672), Expect = 0.0 Identities = 705/716 (98%) Strand = Plus / Minus Query: 45 gcttgcgtgtggagcgatttcccattcaactcggtgtgccgtgggtaccccgcgtaaata 104 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1859 gcttgcgtgtggagcgatttcccagtcaactcggtgtgccgtgggtaccccgcgtaaata 1800 Query: 105 agcccatagaccctgtttagacttatttacctatttgcattaatgatagatgatacaaga 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1799 agcccatagaccctgtttagacttatttacctatttgcattaatgatagatgatacaaga 1740 Query: 165 tactgtgagatatggattcatcacatactgaaggttttgaattggtatcactttattttg 224 ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1739 tactgtgagatatggattcatcacatactgaaggttttgaattggtatcacgtgatttgg 1680 Query: 225 atgtccagaatcaccaatgaggaaaaggaatattatgcaactccgtataaaggtttcaaa 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1679 atgtccagaatcaccaatgaggaaaaggaatattatgcaactccgtataaaggtttcaaa 1620 Query: 285 gctttcccgggttccaagacaaggcatcgtgtttatctagaagtagtgaagtcagagtac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1619 gctttcccgggttccaagacaaggcatcgtgtttatctagaagtagtgaagtcagagtac 1560 Query: 345 tagtttgacagatggatctactgcttaattagacaaatgaaactagcggggctaggaaat 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1559 tagtttgacagatggatctactgcttaattagacaaatgaaactagcggggctaggaaat 1500 Query: 405 tttattccgaacaaggacagtaactggtccacagaaattctgtccggaatgggttaaacg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1499 tttattccgaacaaggacagtaactggtccacagaaattctgtccggaatgggttaaacg 1440 Query: 465 aacatcatatagttcggaagatttttttaccactgcagtatttgaactattaacaaaata 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1439 aacatcatatagttcggaagatttttttaccactgcagtatttgaactattaacaaaata 1380 Query: 525 tggagagaagctatcagtcaaatcaaggaagatatggtttcatcagatccacggatatta 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1379 tggagagaagctatcagtcaaatcaaggaagatatggtttcatcagatccacggatatta 1320 Query: 585 tggaaagaaggggactaaaatgtaccgcatttcctttgatagaaagagatatcgtgagac 644 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1319 tggaaagaaggggactaaaatgtaccgcaattcctttgatagaaagagatatcgtgagac 1260 Query: 645 tgatctaatattgaattgtctagaacaaatgatagtagaaaacttagccacgggatttta 704 ||||||||||||| ||||||||||||||||||||||||||| | |||||||| || ||| Sbjct: 1259 tgatctaatattggattgtctagaacaaatgatagtagaaacttaagccacggtatctta 1200 Query: 705 tatactaagaaatgaactggatcattacgggcatgtaaatataccgacagcactga 760 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 tatactaagaaatgaactggatcattacgggcatgtaaatataccgacagcactga 1144 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,726 Number of Sequences: 1807 Number of extensions: 13726 Number of successful extensions: 109 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)