BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZA02RM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1428 1330 0.0 >3x_Contig1428 Length = 9146 Score = 1330 bits (671), Expect = 0.0 Identities = 707/715 (98%), Gaps = 3/715 (0%) Strand = Plus / Minus Query: 45 gctttaagcaacc-aagtggatcagttagttaag-tcccaatcatctatcaagctagtgg 102 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 7726 gctttaagcaacccaagtggatcagttagttaagctcccaatcatctatcaagctagtgg 7667 Query: 103 ctagcgctcttattcaaccagaaggtactcgctggactgtctcatttcccgaacagcgga 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7666 ctagcgctcttattcaaccagaaggtactcgctggactgtctcatttcccgaacagcgga 7607 Query: 163 atattaccgaacgataaacctatcgaacgatacggcggaaaacttttcaataactatgga 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7606 atattaccgaacgataaacctatcgaacgatacggcggaaaacttttcaataactatgga 7547 Query: 223 acctgtattctcgagtagaatctcaattaaatggggtgaacaagagccccacgaggatac 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7546 acctgtattctcgagtagaatctcaattaaatggggtgaacaagagccccacgaggatac 7487 Query: 283 caatacatgggtccttactgctggtaatgggaagttcgtagatgcaagaattgacttaaa 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7486 caatacatgggtccttactgctggtaatgggaagttcgtagatgcaagaattgacttaaa 7427 Query: 343 aaccaatataccacagtggttaataactggagaagaacaagaaattcctacaaaagacgg 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7426 aaccaatataccacagtggttaataactggagaagaacaagaaattcctacaaaagacgg 7367 Query: 403 ctacgagttttctttgaaatttgttcatgaactggattctgtacatggaaatgatcccga 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7366 ctacgagttttctttgaaatttgttcatgaactggattctgtacatggaaatgatcccga 7307 Query: 463 gcgtagtgctgattttggtcatttcaaatccctgacatatagtagtagactcgatgaagg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 7306 gcgtagtgctgattttggtcatttcaaatccctgacatatagtagtagactcgaggaagg 7247 Query: 523 ggagatgtataatgtttctgaggagagagtcatgacgtataaagaaatttggcaaaccat 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7246 ggagatgtataatgtttctgaggagagagtcatgacgtataaagaaatttggcaaaccat 7187 Query: 583 tgacccaataagatcttcaacagatcatctagtacccgtagagtctgatatatatgatgg 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7186 tgacccaataagatcttcaacagatcatctagtacccgtagagtctgatatatatgatgg 7127 Query: 643 atctagtgtcacgtctattgtctgggagctgtcggacgacgccaa-aataatgcacgcgg 701 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 7126 atctagtgtcacgtctattgtctgggagctgtcggacgacgccaagaataatgcacgcgg 7067 Query: 702 gagattgatcagtttaggaaaagttagtcaaggaattggggattttaacggattg 756 ||||||||||||| |||||||||||||||||||||||| ||| | |||||||||| Sbjct: 7066 gagattgatcagtataggaaaagttagtcaaggaattgtggaatataacggattg 7012 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6458 Number of Sequences: 1807 Number of extensions: 6458 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)