BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZA03RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1313 1516 0.0 >3x_Contig1313 Length = 8010 Score = 1516 bits (765), Expect = 0.0 Identities = 841/864 (97%), Gaps = 3/864 (0%) Strand = Plus / Minus Query: 48 aactctagcgacctgtcgctcgccccacagaacctcacccgagaaccacacattacacgc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7123 aactctagcgacctgtcgctcgccccacagaacctcacccgagaaccacacattacacgc 7064 Query: 108 cgccagctcccactatactcatcttgcttcccttaagcgttctcacgattcgttcgctgc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7063 cgccagctcccactatactcatcttgcttcccttaagcgttctcacgattcgttcgctgc 7004 Query: 168 ccttcttcaagagtcttctgattctaattctcattcgaaatcctctacagttaatgaatt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7003 ccttcttcaagagtcttctgattctaattctcattcgaaatcctctacagttaatgaatt 6944 Query: 228 gcttgacatgacattcattgtctcatggttttggctttttggcttttgtcttttaaagct 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6943 gcttgacatgacattcattgtctcatggttttggctttttggcttttgtcttttaaagct 6884 Query: 288 atatcaactttacatataaatatacgtcaaaaggggattcattaattagaaaattctctt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6883 atatcaactttacatataaatatacgtcaaaaggggattcattaattagaaaattctctt 6824 Query: 348 tttcaatagttgctattcattatcaatctattcaactcaattggttattattttcatctt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6823 tttcaatagttgctattcattatcaatctattcaactcaattggttattattttcatctt 6764 Query: 408 tttgtcatcctaaaccatcaacaatatttaaatatatctgttgctacattaagagttact 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6763 tttgtcatcctaaaccatcaacaatatttaaatatatctgttgctacattaagagttact 6704 Query: 468 tcagaaataacaaaaaaatcgatcaagaattaataaaaatgtctttgagttcaaaattga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6703 tcagaaataacaaaaaaatcgatcaagaattaataaaaatgtctttgagttcaaaattga 6644 Query: 528 ctgtcaaggatttggatgtcactggtaaaagagtgttcatcagagttgatttcaacgtcc 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6643 ctgtcaaggatttggatgtcactggtaaaagagtgttcatcagagttgatttcaacgtcc 6584 Query: 588 cattggacggtaagaagatcacttccaaccaaagaattgtagcagctctgcctactattc 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6583 cattggacggtaagaagatcacttccaaccaaagaattgtagcagctctgcctactattc 6524 Query: 648 aatacgttntggaaaagaagccaaaggccattgtcttggcctctcattttggtagaccaa 707 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 6523 aatacgttttggaaaagaagccaaaggccattgtcttggcctctcatttgggtagaccaa 6464 Query: 708 acggtgaagttaacgacatatactcattgggctcagttgccgatgaattgtctagactat 767 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 6463 acggtgaagttaacgacaaatactcattggctccagttgccgatgaattgtctagactat 6404 Query: 768 tgcanaagccagttacctttctgcatgactgtgttgtgggagaagtcaccattgccgtta 827 |||| ||||||||||| || ||||||||||||||| | ||||||||||| |||||||| Sbjct: 6403 tgcaaaagccagttactttcttgcatgactgtgttggtgaagaagtcaccaatgccgtta 6344 Query: 828 acaacgctaagaccggngaagtntttcctattgggaaacttgagatt-cacatcgaanaa 886 ||||||||||| ||| ||||| ||||||||||| |||||||||||| ||||||||| || Sbjct: 6343 acaacgctaaggacggtgaagt-tttcctattggaaaacttgagattccacatcgaagaa 6285 Query: 887 naaggtt-cagaaaggtggatggt 909 |||||| |||||||||||||||| Sbjct: 6284 gaaggttccagaaaggtggatggt 6261 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6962 Number of Sequences: 1807 Number of extensions: 6962 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)