BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC42ZA03RM1.SCF screened BAC_end
         (914 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1313                                                        1516   0.0  

>3x_Contig1313 
          Length = 8010

 Score = 1516 bits (765), Expect = 0.0
 Identities = 841/864 (97%), Gaps = 3/864 (0%)
 Strand = Plus / Minus

                                                                        
Query: 48   aactctagcgacctgtcgctcgccccacagaacctcacccgagaaccacacattacacgc 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7123 aactctagcgacctgtcgctcgccccacagaacctcacccgagaaccacacattacacgc 7064

                                                                        
Query: 108  cgccagctcccactatactcatcttgcttcccttaagcgttctcacgattcgttcgctgc 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7063 cgccagctcccactatactcatcttgcttcccttaagcgttctcacgattcgttcgctgc 7004

                                                                        
Query: 168  ccttcttcaagagtcttctgattctaattctcattcgaaatcctctacagttaatgaatt 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7003 ccttcttcaagagtcttctgattctaattctcattcgaaatcctctacagttaatgaatt 6944

                                                                        
Query: 228  gcttgacatgacattcattgtctcatggttttggctttttggcttttgtcttttaaagct 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6943 gcttgacatgacattcattgtctcatggttttggctttttggcttttgtcttttaaagct 6884

                                                                        
Query: 288  atatcaactttacatataaatatacgtcaaaaggggattcattaattagaaaattctctt 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6883 atatcaactttacatataaatatacgtcaaaaggggattcattaattagaaaattctctt 6824

                                                                        
Query: 348  tttcaatagttgctattcattatcaatctattcaactcaattggttattattttcatctt 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6823 tttcaatagttgctattcattatcaatctattcaactcaattggttattattttcatctt 6764

                                                                        
Query: 408  tttgtcatcctaaaccatcaacaatatttaaatatatctgttgctacattaagagttact 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6763 tttgtcatcctaaaccatcaacaatatttaaatatatctgttgctacattaagagttact 6704

                                                                        
Query: 468  tcagaaataacaaaaaaatcgatcaagaattaataaaaatgtctttgagttcaaaattga 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6703 tcagaaataacaaaaaaatcgatcaagaattaataaaaatgtctttgagttcaaaattga 6644

                                                                        
Query: 528  ctgtcaaggatttggatgtcactggtaaaagagtgttcatcagagttgatttcaacgtcc 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6643 ctgtcaaggatttggatgtcactggtaaaagagtgttcatcagagttgatttcaacgtcc 6584

                                                                        
Query: 588  cattggacggtaagaagatcacttccaaccaaagaattgtagcagctctgcctactattc 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6583 cattggacggtaagaagatcacttccaaccaaagaattgtagcagctctgcctactattc 6524

                                                                        
Query: 648  aatacgttntggaaaagaagccaaaggccattgtcttggcctctcattttggtagaccaa 707
            |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6523 aatacgttttggaaaagaagccaaaggccattgtcttggcctctcatttgggtagaccaa 6464

                                                                        
Query: 708  acggtgaagttaacgacatatactcattgggctcagttgccgatgaattgtctagactat 767
            |||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||
Sbjct: 6463 acggtgaagttaacgacaaatactcattggctccagttgccgatgaattgtctagactat 6404

                                                                        
Query: 768  tgcanaagccagttacctttctgcatgactgtgttgtgggagaagtcaccattgccgtta 827
            |||| ||||||||||| ||  |||||||||||||||  | ||||||||||| ||||||||
Sbjct: 6403 tgcaaaagccagttactttcttgcatgactgtgttggtgaagaagtcaccaatgccgtta 6344

                                                                        
Query: 828  acaacgctaagaccggngaagtntttcctattgggaaacttgagatt-cacatcgaanaa 886
            |||||||||||  ||| ||||| ||||||||||| |||||||||||| ||||||||| ||
Sbjct: 6343 acaacgctaaggacggtgaagt-tttcctattggaaaacttgagattccacatcgaagaa 6285

                                    
Query: 887  naaggtt-cagaaaggtggatggt 909
             |||||| ||||||||||||||||
Sbjct: 6284 gaaggttccagaaaggtggatggt 6261


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6962
Number of Sequences: 1807
Number of extensions: 6962
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)