BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZA06FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1549 985 0.0 >3x_Contig1549 Length = 13677 Score = 985 bits (497), Expect = 0.0 Identities = 549/564 (97%), Gaps = 2/564 (0%) Strand = Plus / Minus Query: 87 tctcaacaccttcttatctaacacatggttcccaaagaaagttgtcttctctgtaatatc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 tctcaacaccttcttatctaacacatggttcccaaagaaagttgtcttctctgtaatatc 509 Query: 147 ttcctgttcgatgctcttatcgtccttcaactcggccgctgcggaacttataaggaactt 206 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 508 ttcctgttcgatgctcttatcgtccttcaactcggccgctgcggaacttagaaggaactt 449 Query: 207 tctagctacatcttcctcatcgcttacggaataaacagactcactgagatcttctttatc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 tctagctacatcttcctcatcgcttacggaataaacagactcactgagatcttctttatc 389 Query: 267 tggcatcttttctggtttgcctatcttgttgacttcgttctattatttttaaattgggga 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 tggcatcttttctggtttgcctatcttgttgacttcgttctattatttttaaattgggga 329 Query: 327 catatcttcaaatttaccagggaggtaattcgattcatacttcgatccgatgaggttctt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 catatcttcaaatttaccagggaggtaattcgattcatacttcgatccgatgaggttctt 269 Query: 387 ttatacttctcgatccgtccaaagattcattccgattcctaaaccactaaaggtaactac 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 ttatacttctcgatccgtccaaagattcattccgattcctaaaccactaaaggtaactac 209 Query: 447 aagaactgaaagaattgaaaaaaagtcttgccaacagatacaggcaagtgcaaga-tata 505 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | | Sbjct: 208 aagaactgaaagaattgaaaaaaagtcttgccaacagaaacaggcaagtgcaagagaaaa 149 Query: 506 ggaccatctggcccatctggcaccttttttccattcatttcacctcatttcatgcattat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 148 ggaccatctggcccatctggcaccttttttccattcatttcacctcatttcatgcaatat 89 Query: 566 gcatgtatgtagctcaattgcagatgcngttacgttgatctgcctaaagcacgtaacggg 625 |||||||||||||||||| |||||| |||||||||||||| ||||||| |||||| | Sbjct: 88 gcatgtatgtagctcaatgcaagatgcggttacgttgatctg-gtaaagcaggtaacgtg 30 Query: 626 actagcaaagggtcctactttctt 649 ||||||||||||||||||| |||| Sbjct: 29 actagcaaagggtcctactatctt 6 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6767 Number of Sequences: 1807 Number of extensions: 6767 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)