BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZA12RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1703 1076 0.0 >3x_Contig1703 Length = 17919 Score = 1076 bits (543), Expect = 0.0 Identities = 568/575 (98%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 54 aaagacggggcctcttatcttctaagtagttactataatttcactgtgaatcaccattga 113 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 aaagacggggcctcttatcttctaagtagttactataatttcactgtgaatcaccattga 518 Query: 114 tgatgatctcttttcagtttttcaggttaataataagagtcccattttctgcagatatat 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 tgatgatctcttttcagtttttcaggttaataataagagtcccattttctgcagatatat 458 Query: 174 gtctaaaatgacaaagaataataacaagtaacatggtattgattttttgtaccctccacc 233 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 457 gtctaaaatgacaaagaataataacaagtaacatggtattgaccgaaggtaccctccacc 398 Query: 234 ttcacgaactgagtaagttgctctcgcaaattgtgccaactggatgtttcacactaacaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 ttcacgaactgagtaagttgctctcgcaaattgtgccaactggatgtttcacactaacaa 338 Query: 294 aaattgaaatcacgtgatattataaacaactcacctttaagtaaattttcacatgtcatt 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 aaattgaaatcacgtgatattataaacaactcacctttaagtaaattttcacatgtcatt 278 Query: 354 tttcatgtgacttaaaacccttcgttccatgaaattctgatttgcagaaacatctagcgc 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 tttcatgtgacttaaaacccttcgttccatgaaattctgatttgcagaaacatctagcgc 218 Query: 414 aggacacaaatcgaatcttcctaacatatccaggaataaa-cagaatataaatataatag 472 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 217 aggacacaaatcgaatcttcctaacatatccaggaataaagcagaatataaatataatag 158 Query: 473 gtttccaactaccaacttttcattattctgttctcagaacatcgaacttttattgtcctt 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 gtttccaactaccaacttttcattattctgttctcagaacatcgaacttttattgtcctt 98 Query: 533 tcaaacttataagatatactttgacttatacggtaatctaatagggtttgtcgtaattgt 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 tcaaacttataagatatactttgacttatacggtaatctaatagggtttgtcgtaattgt 38 Query: 593 agttctaagttgttctaaaaacagctaacataata 627 ||||||||||||||||||||||||||||||||||| Sbjct: 37 agttctaagttgttctaaaaacagctaacataata 3 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7506 Number of Sequences: 1807 Number of extensions: 7506 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)