BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZB02FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1608 1306 0.0 >3x_Contig1608 Length = 13037 Score = 1306 bits (659), Expect = 0.0 Identities = 741/759 (97%), Gaps = 7/759 (0%) Strand = Plus / Plus Query: 92 atctggtttcactacggtatccttcttgattggtgaaactatcttttctggtgacaggtt 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2354 atctggtttcactacggtatccttcttgattggtgaaactatcttttctggtgacaggtt 2413 Query: 152 aaattgggtgacagaatcctctggttcttcgaccctaccctcggtatcagttacctgcac 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2414 aaattgggtgacagaatcctctggttcttcgaccctaccctcggtatcagttacctgcac 2473 Query: 212 taattccaatacaaccccatcttttgttatttcaaagagaatggggtcaccaggttggca 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2474 taattccaatacaaccccatcttttgttatttcaaagagaatggggtcaccaggttggca 2533 Query: 272 aaaccagattcttatcatgtcatttgttttccaacaattaagtccatttaagaatacttt 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2534 aaaccagattcttatcatgtcatttgttttccaacaattaagtccatttaagaatacttt 2593 Query: 332 gaaatctcgtaatttgaacgtaatgctcttcttaatactttgtgatctgcttgaaggtct 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2594 gaaatctcgtaatttgaacgtaatgctcttcttaatactttgtgatctgcttgaaggtct 2653 Query: 392 cgaaccgtcgtttttttctgttgaaaatatgcagtaatgttctagatcatttgcgctaca 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2654 cgaaccgtcgtttttttctgttgaaaatatgcagtaatgttctagatcatttgcgctaca 2713 Query: 452 tgtattcgttactgtaactgcttgtttgaggtacccttgacttttcatgttgtacacggc 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2714 tgtattcgttactgtaactgcttgtttgaggtacccttgacttttcatgttgtacacggc 2773 Query: 512 ttttgtaaatcctattatggctagagtatgtctcgtcaattccaattttatttcctcgat 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2774 ttttgtaaatcctattatggctagagtatgtctcgtcaattccaattttatttcctcgat 2833 Query: 572 cacattatacataatagagtcaatgaagttttctagtattgattgatcaaaacttaag-a 630 ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 2834 cacattagacataatagagtcaatgaagtttcttagtattgattgatcaaaacttaagaa 2893 Query: 631 gttgatttcgtcgttacccgtc-acggtgtatttttcactgtgctcacaatattgtgttc 689 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2894 gttgatttcgtcgttaaccgtcaacggtgtatttttcactgtgctcacaatattgtgttc 2953 Query: 690 attggcgatacctctatt-aacatatcatgttctaattctggttgtaaagatttgaaata 748 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 2954 attggcgatacctctattaaacatatcatgttctaattctgtttgtaaagatttgaaata 3013 Query: 749 atccactatccga-gatcttatgattcgccccttacttttgttgttggatactgaaaggg 807 |||||||| |||| ||||| |||| || |||||||||||||||||| ||||||||| || Sbjct: 3014 atccactaaccgaggatctaatga-tctgcccttacttttgttgttgtatactgaaa-gg 3071 Query: 808 aatttttgtttatatttcagacctaatattgatctgaac 846 |||||||||||||||||||||| ||||| |||||||||| Sbjct: 3072 aatttttgtttatatttcagacttaata-tgatctgaac 3109 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7340 Number of Sequences: 1807 Number of extensions: 7340 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)