BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZB07FM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1575 1051 0.0 >3x_Contig1575 Length = 11952 Score = 1051 bits (530), Expect = 0.0 Identities = 634/658 (96%), Gaps = 8/658 (1%) Strand = Plus / Minus Query: 87 tagctgtcctaccgtaaagtttgaaactggttttgccaacatagaaaacaatccaggccg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5962 tagctgtcctaccgtaaagtttgaaactggttttgccaacatagaaaacaatccaggccg 5903 Query: 147 gttctcagtcccacgcatttcatagtacgcgtcagtataggtaaaatccaaaaaaaaaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5902 gttctcagtcccacgcatttcatagtacgcgtcagtataggtaaaatccaaaaaaaaaaa 5843 Query: 207 aagttgaagatttcagaatattagcatagaggccaaaatccaacaaaaattatactctat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5842 aagttgaagatttcagaatattagcatagaggccaaaatccaacaaaaattatactctat 5783 Query: 267 actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5782 actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 5723 Query: 327 ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5722 ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 5663 Query: 387 gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5662 gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 5603 Query: 447 tccatgaaatatagagaaacagcaagaaataatgccatctaagctatattgtaaacctcg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5602 tccatgaaatatagagaaacagcaagaaataatgccatctaagctatattgtaaacctcg 5543 Query: 507 tagattagtttgatagaaacgatcaatcagattgaaaaggaggc-aagttagagggtttc 565 ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 5542 tagataagtttgatagaaacgatcaatcagattggaaaggaggcaaagttagagggtttc 5483 Query: 566 ttagggaaagcgg-ctcttaatttctgtcacggggcaataaattccctttcga-tcttta 623 |||||||| |||| ||||||||| |||||||| |||||||||||||||||||| |||| | Sbjct: 5482 ttagggaaggcggtctcttaattcctgtcacgtggcaataaattccctttcgattcttca 5423 Query: 624 tacaactgggagttggtactttc-tttctgaaatcctgcttc-aaagatacgggtagttt 681 |||||||| ||||||||||| || |||||||| ||||||||| |||||||| |||||||| Sbjct: 5422 tacaactgtgagttggtactctcttttctgaagtcctgcttcaaaagatactggtagttt 5363 Query: 682 ggtgac-catacttttcggagttct-actagctag-ttgggaaaaatttggttgggtt 736 | |||| ||||||| || ||||||| ||||||||| |||||||| ||||||| |||| Sbjct: 5362 gttgacacatacttatctgagttctaactagctagtttgggaaagttttggtttggtt 5305 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 22,834 Number of Sequences: 1807 Number of extensions: 22834 Number of successful extensions: 521 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)