BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZC01RM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1442 1540 0.0 >3x_Contig1442 Length = 8270 Score = 1540 bits (777), Expect = 0.0 Identities = 826/837 (98%), Gaps = 4/837 (0%) Strand = Plus / Minus Query: 44 gcttgtaacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaag 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5243 gcttgtaacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaag 5184 Query: 104 aaaaat-acataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtg 162 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5183 aaaaatcacataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtg 5124 Query: 163 aaaagaaaaaaacaccaaatgtatcttcactggctcctgaacaacaccttatatttcaaa 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5123 aaaagaaaaaaacaccaaatgtatcttcactggctcctgaacaacaccttatatttcaaa 5064 Query: 223 acaataaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttac 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5063 acaataaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttac 5004 Query: 283 gtatgttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgc 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5003 gtatgttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgc 4944 Query: 343 tgaagagggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaa 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4943 tgaagagggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaa 4884 Query: 403 agatctttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctc 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4883 agatctttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctc 4824 Query: 463 agtggttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagt 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4823 agtggttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagt 4764 Query: 523 tggagggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4763 tggagggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtg 4704 Query: 583 atgatgggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgt 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4703 atgatgggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgt 4644 Query: 643 ttgaactcctgtactatttccagtggtgtttgttgagtttgattcttgacaccagtacct 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4643 ttgaactcctgtactatttccagtggtgtttgttgagtttgattcttgacaccagtacct 4584 Query: 703 atgaaattcccatgatttcagttggcacagtcttgagcaatatttggtgcgcttacacct 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4583 atgaaattcccatgatttcagttggcacagtcttgagcaatatttggtgcgcttacacct 4524 Query: 763 tctacatttgggggaactgtttttgaatgattcttccaattttccacagctgaaattagc 822 ||||||||| ||||||||| ||||| |||| |||||| |||| ||||||||||||||||| Sbjct: 4523 tctacattt-ggggaactg-ttttggatga-tcttcccatttcccacagctgaaattagc 4467 Query: 823 acactgcctgacttctgtagcctcatgttttcttgacgagtttctcattaccacgga 879 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||| Sbjct: 4466 acactgcctgactcctgtagcctcatgtttcctgcacgagtttctcattaccacgga 4410 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7397 Number of Sequences: 1807 Number of extensions: 7397 Number of successful extensions: 119 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)