BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZC05RM1.SCF screened BAC_end (885 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1295 1368 0.0 >3x_Contig1295 Length = 7117 Score = 1368 bits (690), Expect = 0.0 Identities = 813/840 (96%), Gaps = 11/840 (1%) Strand = Plus / Plus Query: 49 acgttggt-accgtttccaagatgtatgtttcgaaaatggaattactgtcatgggtatgc 107 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 acgttggtcaccgtttccaagatgtatgtttcgaaaatggaattactgtcatgggtatgc 349 Query: 108 aaggaaacatcgacggtgtttctggtgatattgctttgttggcaccatcattcatcatca 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 aaggaaacatcgacggtgtttctggtgatattgctttgttggcaccatcattcatcatca 409 Query: 168 ccgaagacgatgtctccaccattgtggaaagagttaccaagtctgttgatgatatgaccg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 ccgaagacgatgtctccaccattgtggaaagagttaccaagtctgttgatgatatgaccg 469 Query: 228 ttctactaaaggctgaaggccatttctgagaaggcttcagctgtgctaagtattctaacg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 ttctactaaaggctgaaggccatttctgagaaggcttcagctgtgctaagtattctaacg 529 Query: 288 actatataacggcacatacgtagacgtattgtgccacctcttctctgtacttgttcttta 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 actatataacggcacatacgtagacgtattgtgccacctcttctctgtacttgttcttta 589 Query: 348 aaactccatgtctcatcataacagttatgtgtcaagcaaatcagttccttttttcctaat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 aaactccatgtctcatcataacagttatgtgtcaagcaaatcagttccttttttcctaat 649 Query: 408 atttttttgacactttgaacctttaagctgtttttattcgcgtaaatgtatattattaac 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 atttttttgacactttgaacctttaagctgtttttattcgcgtaaatgtatattattaac 709 Query: 468 aaagtgatcgaaactaaaatatcagcaggaaagtcaaaaatagaaggccgagttaagggt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 aaagtgatcgaaactaaaatatcagcaggaaagtcaaaaatagaaggccgagttaagggt 769 Query: 528 cctacattaacatcaacgtagtaagattttcttagtaactcacaaattccggcccagtaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 cctacattaacatcaacgtagtaagattttcttagtaactcacaaattccggcccagtaa 829 Query: 588 gtagatatatatatgtacgtcttttttcggcattgtagagcatctgctgtaagcttatca 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 gtagatatatatatgtacgtcttttttcggcattgtagagcatctgctgtaagcttatca 889 Query: 648 gctgtcattactttctgctncgtcagcattgatgaaaaccccgctcatatctcattaac- 706 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 890 gctgtcattactttctgctcggtcagcattgatgaaaacccggctcatatctcattaact 949 Query: 707 tcgnctcgctcct-atgtaaagatttatacct-agaaat-attaggaatgattagtgaat 763 ||| ||||||||| |||||||||| ||||||| |||||| || ||||||||| ||||||| Sbjct: 950 tcgcctcgctcctaatgtaaagatatatacctaagaaataataaggaatgataagtgaat 1009 Query: 764 ctatccaaaaa-ctggtccaactattctt-aaccta-ttttcttttactgggtgagtcac 820 ||||||||||| ||||||||||||||||| |||||| |||||||| |||| ||||||||| Sbjct: 1010 ctatccaaaaacctggtccaactattcttcaacctagttttctttcactgtgtgagtcac 1069 Query: 821 actttttta-caaatatccatttgt-aggtacattttttttca-tgtccctatcaaaact 877 ||| || || |||||| |||| ||| || ||||| |||||||| |||| ||||||||||| Sbjct: 1070 actattataccaaatacccatatgtaagttacatcttttttcagtgtcactatcaaaact 1129 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7065 Number of Sequences: 1807 Number of extensions: 7065 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 885 length of database: 10,358,551 effective HSP length: 16 effective length of query: 869 effective length of database: 10,329,639 effective search space: 8976456291 effective search space used: 8976456291 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)