BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZC08RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1762 1287 0.0 >3x_Contig1762 Length = 22098 Score = 1287 bits (649), Expect = 0.0 Identities = 715/731 (97%), Gaps = 5/731 (0%) Strand = Plus / Plus Query: 48 tatctattgctcaaccttacccaaaggttgccccattttgactttgtcgccaacgttgat 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11526 tatctattgctcaaccttacccaaaggttgccccattttgactttgtcgccaacgttgat 11585 Query: 108 tttgaagttaaactctcttggtgcttcaaagcataaaaccactgttgatcctaacatgaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11586 tttgaagttaaactctcttggtgcttcaaagcataaaaccactgttgatcctaacatgaa 11645 Query: 168 accacccatttcttcaccctttatcaaaggcacgccacctaatactttgctagcattttc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11646 accacccatttcttcaccctttatcaaaggcacgccacctaatactttgctagcattttc 11705 Query: 228 atatgttgcttcataacaagtatgcggtttacaatgtctctgagttttttcatttgtaat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11706 atatgttgcttcataacaagtatgcggtttacaatgtctctgagttttttcatttgtaat 11765 Query: 288 tagttctttatcaaagttcaatttgatcgatccgacatttgtagctccgactggggtcat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11766 tagttctttatcaaagttcaatttgatcgatccgacatttgtagctccgactggggtcat 11825 Query: 348 actaaagaatccatgctntccagtgacctaacaatgcaacacgttcattgagaacaaaca 407 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 11826 actaaagaatccatgct-tccagtgacctaacaatgcaacacgttcattgagaacaaaca 11884 Query: 408 agtttgggaaatttctctggaaataaggtgccaccgagaagagctcacctgggaaatgac 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11885 agtttgggaaatttctctggaaataaggtgccaccgagaagagctcacctgggaaatgac 11944 Query: 468 gacgaagtttgcaaacccaatttactggagaatggtagtgatgataatcaccaggagcca 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11945 gacgaagtttgcaaacccaatttactggagaatggtagtgatgataatcaccaggagcca 12004 Query: 528 aataaatgaccgcaaaatatagctgggtatcggtagaagataatttttgtttgacatagt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12005 aataaatgaccgcaaaatatagctgggtatcggtagaagataatttttgtttgacatagt 12064 Query: 588 tgggggatagctcacccaata-ggtaaaagtcttggaagaatcttgatctgagatggctt 646 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12065 tgggggatagctcacccaatagggtaaaagtcttggaagaatcttgatctgagatggctt 12124 Query: 647 ggntcttttccattttat-atcgaaagggtg-aaatggnctt-actttgagatcttgggg 703 || ||||||||||||||| ||||||||| || |||||| ||| ||||||||| | ||||| Sbjct: 12125 ggttcttttccattttataatcgaaaggttgtaaatggtcttcactttgagaacctgggg 12184 Query: 704 gatgacccatgatatcgttcaaactgtttgggatatcattgattcttgcaatatctctgg 763 |||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 12185 tatgaccaatgatatcgttcaaactgtatgggatatcattgattcttgcaaattctctgt 12244 Query: 764 gatcattatca 774 ||||||||||| Sbjct: 12245 gatcattatca 12255 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6441 Number of Sequences: 1807 Number of extensions: 6441 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)