BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZD01RM1.SCF screened BAC_end (876 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1283 1259 0.0 >3x_Contig1283 Length = 6261 Score = 1259 bits (635), Expect = 0.0 Identities = 660/667 (98%), Gaps = 1/667 (0%) Strand = Plus / Minus Query: 48 taccagagtgtctaccgaagacaccatgcaaatttggaccgaccttgtgtggaccaccgg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4272 taccagagtgtctaccgaagacaccatgcaaatttggaccgaccttgtgtggaccaccgg 4213 Query: 108 cttcaacggtgtgacattgcaaacatctggtcttgaacaaagtagcacccttcttttcgg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4212 cttcaacggtgtgacattgcaaacatctggtcttgaacaaagtagcacccttcttttcgg 4153 Query: 168 aacccttcttgtatggagctggcattatgactttatattagttgtgttggttgtgtaaca 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4152 aacccttcttgtatggagctggcattatgactttatattagttgtgttggttgtgtaaca 4093 Query: 228 gttatttgatttgacgaatcaatccttaatactgatagtttgggaaactttaattaagat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4092 gttatttgatttgacgaatcaatccttaatactgatagtttgggaaactttaattaagat 4033 Query: 288 agaaaggagaaaaaagaaaacgctaaaaagacttgctaaagaaacatcaaattcaatcga 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4032 agaaaggagaaaaaagaaaacgctaaaaagacttgctaaagaaacatcaaattcaatcga 3973 Query: 348 atatcaaatcttaatatgttagttatatatgaaattatcaacaaaccatagtgcgcatac 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3972 atatcaaatcttaatatgttagttatatatgaaattatcaacaaaccatagtgcgcatac 3913 Query: 408 taaaatttttctcctacctgtttttaactacttaaaccgaaaaaatgcttcgaaacaagt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3912 taaaatttttctcctacctgtttttaactacttaaaccgaaaaaatgcttcgaaacaagt 3853 Query: 468 ctatcatttcgggaacatcggtcaagacacgagatgagccaaattctgtgaagcctctga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3852 ctatcatttcgggaacatcggtcaagacacgagatgagccaaattctgtgaagcctctga 3793 Query: 528 gacttttttctcattggtttcccgttgtgcgttttgctgcagggtaatcttaatggggga 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3792 gacttttttctcattggtttcccgttgtgcgttttgctgcagggtaatcttaatggggat 3733 Query: 588 taaagcgtggggaaaagc-attcttgtcagaagttggacgtcactgtgaacggaagcgat 646 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 3732 taaagcgtggggaaaagcaattcttgtcagaggttggacgtcactgtgaacggaagcgat 3673 Query: 647 ctgattggttggctgatgtatggtacagtcacgtgatacgtactgaccggcacgtgaaca 706 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 3672 ctgattggttggctgatgtatgttacagtcacgtgatacgtactgaccggcacgtgacaa 3613 Query: 707 ttaactt 713 ||||||| Sbjct: 3612 ttaactt 3606 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6884 Number of Sequences: 1807 Number of extensions: 6884 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 876 length of database: 10,358,551 effective HSP length: 16 effective length of query: 860 effective length of database: 10,329,639 effective search space: 8883489540 effective search space used: 8883489540 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)