BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZD09RM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1629 1235 0.0 >3x_Contig1629 Length = 12481 Score = 1235 bits (623), Expect = 0.0 Identities = 736/766 (96%), Gaps = 8/766 (1%) Strand = Plus / Minus Query: 45 gcttccaagaaagacccacagaggtttgagaaaggttgcttgtatcggtgcttggcatcc 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9613 gcttccaagaaagacccacagaggtttgagaaaggttgcttgtatcggtgcttggcatcc 9554 Query: 105 agcccacgttatgtggtccgttgctagagctggtcaaagaggttaccaccacagaacctc 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9553 agcccacgttatgtggtccgttgctagagctggtcaaagaggttaccaccacagaacctc 9494 Query: 165 tattaaccacaaggtctacagagttggtaagggtgacgacgaagctaacgccgctaccta 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9493 tattaaccacaaggtctacagagttggtaagggtgacgacgaagctaacgccgctaccga 9434 Query: 225 attcgacagaaccaagaagaccatcaccccaatgggtggtttcgtccactacggtgctat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9433 attcgacagaaccaagaagaccatcaccccaatgggtggtttcgtccactacggtgctat 9374 Query: 285 caacaatgatttcgttatcttgaagggttctatcccaggtaccagaaagagagttgttac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9373 caacaatgatttcgttatcttgaagggttctatcccaggtaccagaaagagagttgttac 9314 Query: 345 tttaagaaagtccttgtacaccaacacctccagaaagggccttggaagaagttaccttga 404 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 9313 tttaagaaagtccttgtacaccaacacctccagaaa-ggccttggaagaagttaccttga 9255 Query: 405 agtggatcgacactgcttctaagttcggtaagggtagattccaaaccccagctgaaaagc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9254 agtggatcgacactgcttctaagttcggtaagggtagattccaaaccccagctgaaaagc 9195 Query: 465 acgctttcttgggtactttgaagaaggacttataaactcctcaactctaatagagtcgaa 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9194 acgctttcttgggtactttgaagaaggacttataaactcctcaactctaatagagtcgaa 9135 Query: 525 ttgagtaaaaagctttgcatgctgtaattttatagactagttttggagtactcaagaaag 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9134 ttgagtaaaaagctttgcatgctgtaattttatagactagttttggagtactcaagaaag 9075 Query: 585 tgtttacactttctttcactatcccatcggctggttcataatatttnctgntgntttgac 644 |||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 9074 tgtttacactttctttcactatcccatcggctggttcataatatttcctgttgttttgac 9015 Query: 645 aactatctttaaatatgaaaatattagcatttgaattaattattatttacacgcgctttc 704 ||||||||||||||||||||||||||||||||||| ||| || || |||||||||| ||| Sbjct: 9014 aactatctttaaatatgaaaatattagcatttgaa-taaataataattacacgcgc-ttc 8957 Query: 705 cttcttgcgaggttatttttcttggaaagccactggagaagcctncgcggttctcattaa 764 |||||||| | |||||||||| |||| | ||||| || ||||| |||||| |||| || Sbjct: 8956 cttcttgc-aagttatttttc-tggagaagcactgaag-agcctccgcggtcttcatcaa 8900 Query: 765 acggcttttttttcttgctttttttcccatgattggaatactgttt 810 ||||| || ||||||| ||||||| ||||||||| |||||||| Sbjct: 8899 --cgctttcttctcttgctctttttccgatgattggagtactgttt 8856 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7167 Number of Sequences: 1807 Number of extensions: 7167 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)