BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZD10FM1.SCF screened BAC_end (881 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1804 1035 0.0 >3x_Contig1804 Length = 51183 Score = 1035 bits (522), Expect = 0.0 Identities = 607/626 (96%), Gaps = 7/626 (1%) Strand = Plus / Minus Query: 87 gcagcttgatttcttctgatttcagctggttcagagactacaatcttggaggcaccatga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22796 gcagcttgatttcttctgatttcagctggttcagagactacaatcttggaggcaccatga 22737 Query: 147 ccttgcaaagctaaaatggtggctaatccaattggacctgcgccaagaactaaggcggat 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22736 ccttgcaaagctaaaatggtggctaatccaattggacctgcgccaagaactaaggcggat 22677 Query: 207 tggcccttctgtaacttggagattctaacagcatgccatgagacggagattggttcgact 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22676 tggcccttctgtaacttggagattctaacagcatgccatgagacggagattggttcgact 22617 Query: 267 aaggctgcaacgtccaatggtaaagtgtttggaatcttaacaacgtgcttttcactaaca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22616 aaggctgcaacgtccaatggtaaagtgtttggaatcttaacaacgtgcttttcactaaca 22557 Query: 327 acgactttttcagcaaaaccaccactgtgaactcctagacccatgaaacccaaatgggca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22556 acgactttttcagcaaaaccaccactgtgaactcctagacccatgaaacccaaatgggca 22497 Query: 387 caacagttgtagaaccctctttgacaagcagcacattcagcatccttagcatgtgcagcg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22496 caacagttgtagaaccctctttgacaagcagcacattcagcatccttagcatgtgcagcg 22437 Query: 447 ttaggccaagtgtaatgatcaagacatgtaccggtggcttctacaac-acatgatcacca 505 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 22436 ttaggccaagtgtaatgatcaagacatgtaccggtggcttctacaacaacatgatcacca 22377 Query: 506 gccttgatgttggttacttttggtccaacttttgatacgataccggacatctcatgaccc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22376 gccttgatgttggttacttttggtccaacttttgatacgataccggacatctcatgaccc 22317 Query: 566 atatccttgaggcaattcaagaacacttaacattgtggaccctgccattcttct-gaaag 624 ||| ||||||||||| ||||| ||| |||||| ||||||| ||||| |||||| ||||| Sbjct: 22316 ata-gcttgaggcaatccaagaccac-taacatcgtggaccttgcca-tcttctggaaag 22260 Query: 625 aaaataggaccatcttagtatttgtgtaaattactaccgcagat-ccacaccatgagact 683 ||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||| Sbjct: 22259 aaaataggaccatctaggtattcgtgtaaatcactaccgcagataccacaccatgagac- 22201 Query: 684 ttcgaatccaattccattatctgttt 709 ||||| | ||||||||| |||||||| Sbjct: 22200 ttcgatttcaattccatcatctgttt 22175 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5969 Number of Sequences: 1807 Number of extensions: 5969 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 881 length of database: 10,358,551 effective HSP length: 16 effective length of query: 865 effective length of database: 10,329,639 effective search space: 8935137735 effective search space used: 8935137735 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)