BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZE02FM1.SCF screened BAC_end (976 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1323 1138 0.0 >3x_Contig1323 Length = 7472 Score = 1138 bits (574), Expect = 0.0 Identities = 625/637 (98%), Gaps = 4/637 (0%) Strand = Plus / Minus Query: 86 caaatcttcttcagaaagctcttcttcattgttggcatcctttttcttattgttttgttc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5664 caaatcttcttcagaaagctcttcttcattgttggcatcctttttcttattgttttgttc 5605 Query: 146 atctggtacagtaattggcttctcttcggcgcctggagcagcggcttcctttacgatatc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5604 atctggtacagtaattggcttctcttcggcgcctggagcagcggcttcctttacgatatc 5545 Query: 206 gttatctttcgtcatcagtcaatactagaatccaacggtataatgaaattctaaaaatat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5544 gttatctttcgtcatcagtcaatactagaatccaacggtataatgaaattctaaaaatat 5485 Query: 266 tttcaaatacaattaccggtactcaccaatatcagaaccaatcaatttatcgtcttcgat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5484 tttcaaatacaattaccggtactcaccaatatcagaaccaatcaatttatcgtcttcgat 5425 Query: 326 tttccttagcctttacaagtaggattgtttatcaaatgtctcgttatagctactatatgc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5424 tttccttagcctttacaagtaggattgtttatcaaatgtctcgttatagctactatatgc 5365 Query: 386 ttaaatatcaaactgaaccttaaaaccaaagattttgccacccaatagagaaatcattgt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5364 ttaaatatcaaactgaaccttaaaaccaaagattttgccacccaatagagaaatcattgt 5305 Query: 446 gaacggatatgaagttacccgcatatttaatattcaagaatagcatcaattgaagtgatg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5304 gaacggatatgaagttacccgcatatttaatattcaagaatagcatcaattgaagtgatg 5245 Query: 506 acagctaccaacatggcgtcagactatgctcaatagtttcccattgaatcgtctggaaac 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5244 acagctaccaacatggcgtcagactatgctcaatagtttcccattgaatcgtctggaaac 5185 Query: 566 aagcagngcttctcatattatttaaaattattctttttgcttta-taccgttattt-agt 623 | |||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 5184 aggcagtgcttctcatattatttaaaattattctttttgctttagtaccgttatttaagt 5125 Query: 624 tcactttaatagtgatgttgtgtacttacag-aggaaatccccattttttgcatgtctaa 682 |||||||| |||||||||||||||||||||| |||||||||||||| | |||||||||| Sbjct: 5124 tcactttagtagtgatgttgtgtacttacagaaggaaatccccattataggcatgtctaa 5065 Query: 683 tccaattcaagatctttttggattacgatgacgtttg 719 |||||||||||||||| || || |||||||||||||| Sbjct: 5064 tccaattcaagatcttatt-gaatacgatgacgtttg 5029 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8254 Number of Sequences: 1807 Number of extensions: 8254 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 976 length of database: 10,358,551 effective HSP length: 16 effective length of query: 960 effective length of database: 10,329,639 effective search space: 9916453440 effective search space used: 9916453440 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)