BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC42ZE03FM1.SCF screened BAC_end
         (949 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1497                                                        1267   0.0  

>3x_Contig1497 
          Length = 11582

 Score = 1267 bits (639), Expect = 0.0
 Identities = 745/771 (96%), Gaps = 7/771 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   tggctggtcttcgtaaaagacaaggtattgatgttgaagaagagggtgccctataaaagg 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5547 tggctggtcttcgtaaaagacaaggtattgatgttgaagaagagggtgccctagaaaagg 5488

                                                                        
Query: 148  aaggaattgctcaagataaagaaattatgttagcaaatttgaaaatcttaggagagaact 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5487 aaggaattgctcaagataaagaaattatgttagcaaatttgaaaatcttaggagagaact 5428

                                                                        
Query: 208  ctcagttacgcccagaaaatgtgacatttgtcagtaaagagttcgtacaagataccgctg 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5427 ctcagttacgcccagaaaatgtgacatttgtcagtaaagagttcgtacaagataccgctg 5368

                                                                        
Query: 268  gtgctaatggagaaacgcaaaagaaatgcaatgaaaatttcatgttagcactagcacttt 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5367 gtgctaatggagaaacgcaaaagaaatgcaatgaaaatttcatgttagcactagcacttt 5308

                                                                        
Query: 328  gtcacactgttcttgtggaagaaaacaaagatgatccagaaattatggatttcaaggctc 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5307 gtcacactgttcttgtggaagaaaacaaagatgatccagaaattatggatttcaaggctc 5248

                                                                        
Query: 388  aatctccagacgaagcagctcttgttggtactgcaagatacatgggtttcagctttgttg 447
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5247 aatctccagacgaagcagctcttgttggtactgcaagagacatgggtttcagctttgttg 5188

                                                                        
Query: 448  gtagaaccaaaaacggggtaattgtcgatattcagggagttcagaaggaatacagattac 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5187 gtagaaccaaaaacggggtaattgtcgatattcagggagttcagaaggaatacagattac 5128

                                                                        
Query: 508  tcaatgtgttggaattcaactctactagatagagaatgtcatgcattctataaattccat 567
            ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 5127 tcaatgtgttggaattcaactctactagaaagagaatgtcatgcattctaaaaattccat 5068

                                                                        
Query: 568  ctgaaaatccaaacgaagaaccaagagctttgctaatctgtaaaggtgcagactcgatca 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5067 ctgaaaatccaaacgaagaaccaagagctttgctaatctgtaaaggtgcagactcgatca 5008

                                                                        
Query: 628  tctattccagactaagtaagatcaatgatgataagctactagaaaagacggccttgcatt 687
            ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 5007 tctattccagactaagtaagaacaatgatgaaaagctactagaaaagacggccttgcatt 4948

                                                                        
Query: 688  tggatc-atatgccacagaagggttaagatctctat-tatttgccaaagagaattgtcat 745
            |||| | ||||||||||||||| |||||| |||||| ||||  |||||||||||||||||
Sbjct: 4947 tggaacaatatgccacagaaggtttaagaactctatgtattgcccaaagagaattgtcat 4888

                                                                        
Query: 746  ggaaag-attcccagaatgggacg-aaaacatgata-tgcagctgctggccttgttgatc 802
            |||||| || || ||||||| ||| ||||||||| | ||||||||||| |||||||||||
Sbjct: 4887 ggaaagaataccaagaatggaacgaaaaacatgagattgcagctgctgcccttgttgatc 4828

                                                               
Query: 803  gtgaagatgaattggaaaa-gtccctgatgt-atcgaacgggagttaactt 851
            ||||||||||| ||||||| ||| ||||||| |||||||| ||||||||||
Sbjct: 4827 gtgaagatgaaatggaaaaggtcgctgatgtaatcgaacgtgagttaactt 4777


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6918
Number of Sequences: 1807
Number of extensions: 6918
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)