BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZE03FM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1497 1267 0.0 >3x_Contig1497 Length = 11582 Score = 1267 bits (639), Expect = 0.0 Identities = 745/771 (96%), Gaps = 7/771 (0%) Strand = Plus / Minus Query: 88 tggctggtcttcgtaaaagacaaggtattgatgttgaagaagagggtgccctataaaagg 147 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5547 tggctggtcttcgtaaaagacaaggtattgatgttgaagaagagggtgccctagaaaagg 5488 Query: 148 aaggaattgctcaagataaagaaattatgttagcaaatttgaaaatcttaggagagaact 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5487 aaggaattgctcaagataaagaaattatgttagcaaatttgaaaatcttaggagagaact 5428 Query: 208 ctcagttacgcccagaaaatgtgacatttgtcagtaaagagttcgtacaagataccgctg 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5427 ctcagttacgcccagaaaatgtgacatttgtcagtaaagagttcgtacaagataccgctg 5368 Query: 268 gtgctaatggagaaacgcaaaagaaatgcaatgaaaatttcatgttagcactagcacttt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5367 gtgctaatggagaaacgcaaaagaaatgcaatgaaaatttcatgttagcactagcacttt 5308 Query: 328 gtcacactgttcttgtggaagaaaacaaagatgatccagaaattatggatttcaaggctc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5307 gtcacactgttcttgtggaagaaaacaaagatgatccagaaattatggatttcaaggctc 5248 Query: 388 aatctccagacgaagcagctcttgttggtactgcaagatacatgggtttcagctttgttg 447 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5247 aatctccagacgaagcagctcttgttggtactgcaagagacatgggtttcagctttgttg 5188 Query: 448 gtagaaccaaaaacggggtaattgtcgatattcagggagttcagaaggaatacagattac 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5187 gtagaaccaaaaacggggtaattgtcgatattcagggagttcagaaggaatacagattac 5128 Query: 508 tcaatgtgttggaattcaactctactagatagagaatgtcatgcattctataaattccat 567 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 5127 tcaatgtgttggaattcaactctactagaaagagaatgtcatgcattctaaaaattccat 5068 Query: 568 ctgaaaatccaaacgaagaaccaagagctttgctaatctgtaaaggtgcagactcgatca 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5067 ctgaaaatccaaacgaagaaccaagagctttgctaatctgtaaaggtgcagactcgatca 5008 Query: 628 tctattccagactaagtaagatcaatgatgataagctactagaaaagacggccttgcatt 687 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 5007 tctattccagactaagtaagaacaatgatgaaaagctactagaaaagacggccttgcatt 4948 Query: 688 tggatc-atatgccacagaagggttaagatctctat-tatttgccaaagagaattgtcat 745 |||| | ||||||||||||||| |||||| |||||| |||| ||||||||||||||||| Sbjct: 4947 tggaacaatatgccacagaaggtttaagaactctatgtattgcccaaagagaattgtcat 4888 Query: 746 ggaaag-attcccagaatgggacg-aaaacatgata-tgcagctgctggccttgttgatc 802 |||||| || || ||||||| ||| ||||||||| | ||||||||||| ||||||||||| Sbjct: 4887 ggaaagaataccaagaatggaacgaaaaacatgagattgcagctgctgcccttgttgatc 4828 Query: 803 gtgaagatgaattggaaaa-gtccctgatgt-atcgaacgggagttaactt 851 ||||||||||| ||||||| ||| ||||||| |||||||| |||||||||| Sbjct: 4827 gtgaagatgaaatggaaaaggtcgctgatgtaatcgaacgtgagttaactt 4777 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6918 Number of Sequences: 1807 Number of extensions: 6918 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)