BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZE07FM1.SCF screened BAC_end (964 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1063 809 0.0 >3x_Contig1063 Length = 5012 Score = 809 bits (408), Expect = 0.0 Identities = 438/447 (97%), Gaps = 1/447 (0%) Strand = Plus / Minus Query: 87 ttgatttataattgaaattgtttacaattcgtgataacgggtcatctgaagaacagtctt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3467 ttgatttataattgaaattgtttacaattcgtgataacgggtcatctgaagaacagtctt 3408 Query: 147 tcggtttacttagctttatggcggattgaggataatcgaccggaatgttgaaaacacatt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3407 tcggtttacttagctttatggcggattgaggataatcgaccggaatgttgaaaacacatt 3348 Query: 207 tcactttcttttgattctgatcttgatcagtggtaataaacgttagcgagtaggtcgtga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3347 tcactttcttttgattctgatcttgatcagtggtaataaacgttagcgagtaggtcgtga 3288 Query: 267 catattgtcctttccttaacattacaatatctgacccagccaaatggcacaattggtcaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3287 catattgtcctttccttaacattacaatatctgacccagccaaatggcacaattggtcaa 3228 Query: 327 tttcggcttttctttgcaacttcaaggcatttctcaatttgaattttttctctgcatttt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3227 tttcggcttttctttgcaacttcaaggcatttctcaatttgaattttttctctgcatttt 3168 Query: 387 cattatgggatgatttggcggtaatttcaagactggttgccttctctgcangtactgatt 446 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3167 cattatgggatgatttggcggtaatttcaagactggttgccttctctgcaggtactgatt 3108 Query: 447 tttctgcctttgaccgtctccctctctttcttctataactatgtccagcattttttcttt 506 |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| | Sbjct: 3107 tttctgcctttgaccgtctccctctcttcctcctataactatgtccagcattttttc-tc 3049 Query: 507 ttgccagcttcactttttttcggatgt 533 ||| |||||||||| | ||||| |||| Sbjct: 3048 ttgtcagcttcactctctttcgtatgt 3022 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,097 Number of Sequences: 1807 Number of extensions: 11097 Number of successful extensions: 94 Number of sequences better than 1.0e-20: 1 length of query: 964 length of database: 10,358,551 effective HSP length: 16 effective length of query: 948 effective length of database: 10,329,639 effective search space: 9792497772 effective search space used: 9792497772 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)