BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZE08FM1.SCF screened BAC_end (912 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig805 529 e-150 >3x_Contig805 Length = 3584 Score = 529 bits (267), Expect = e-150 Identities = 464/518 (89%), Gaps = 10/518 (1%) Strand = Plus / Plus Query: 87 cttttcataccaagaaaagcagtttttaaacgcgtcttccgttatatcagcttatgattc 146 ||||||||||||| ||||||||||||||||| |||||| ||| | | | |||| | Sbjct: 1855 cttttcataccaataaaagcagtttttaaacaaatcttccaaaataactgataatgaaac 1914 Query: 147 atggatggctaatattatattcaatataatatttcagttttatacattccattttgacac 206 || |||| ||||| |||||| ||||||||||||||| ||||||| || || | ||||| Sbjct: 1915 attaatggggaatatgatattcgatataatatttcagtgttatacaatcaatatagacac 1974 Query: 207 actccccaaatttatcgaagttatgtcatggaatgattggactgatggtatttttggaac 266 ||||||||| || |||||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 1975 actccccaagttaatcgaaataatatcatggaatgattggactgatggtatttttggaac 2034 Query: 267 cttgaaaactttcaatgttgattctcaattagtcggtttgttgtgtctcttcaatgtgtg 326 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2035 cttgaaaactgtcaatgttgattctcaattagtcggtttgttgtgtctcttcaatgtgtg 2094 Query: 327 gagtgtcatccctgtcactcatcgtaaacgggtggttactactattatcgacgagttatg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2095 gagtgtcatccctgtcactcatcgtaaacgggtggttactactattatcgacgagttatg 2154 Query: 387 gaatctactgtctgttgatactgacttccacatcataagcattctttttcat-aattact 445 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2155 gaatctactgtctgttgatactgacttccacatcataagcattctttttcataaattact 2214 Query: 446 ccgggtc-aaatactcccggattaagatctttc-acggatcagattc-tgccctc-aaca 501 | | || |||||||||||||| |||||||||| ||||||||||||| |||| || |||| Sbjct: 2215 cgtgttcaaaatactcccggataaagatctttcaacggatcagattcatgccatcaaaca 2274 Query: 502 taaattctatgcc--taattaagagggttggc-aattattaacg-tttgaactgggactt 557 ||||||||||||| ||| |||||| ||||| ||||||||||| ||||||||| |||| Sbjct: 2275 taaattctatgccataaataaagaggtttggcaaattattaacgttttgaactgtgacta 2334 Query: 558 ccctgaattttttgatga-aaaacggttttatttttcc 594 | ||||||| ||||||| |||||||| |||||||||| Sbjct: 2335 cactgaattagttgatgagaaaacggtattatttttcc 2372 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7078 Number of Sequences: 1807 Number of extensions: 7078 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 912 length of database: 10,358,551 effective HSP length: 16 effective length of query: 896 effective length of database: 10,329,639 effective search space: 9255356544 effective search space used: 9255356544 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)