BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC42ZE08FM1.SCF screened BAC_end
         (912 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig805                                                          529   e-150

>3x_Contig805 
          Length = 3584

 Score =  529 bits (267), Expect = e-150
 Identities = 464/518 (89%), Gaps = 10/518 (1%)
 Strand = Plus / Plus

                                                                        
Query: 87   cttttcataccaagaaaagcagtttttaaacgcgtcttccgttatatcagcttatgattc 146
            ||||||||||||| |||||||||||||||||   ||||||   ||| | | | ||||  |
Sbjct: 1855 cttttcataccaataaaagcagtttttaaacaaatcttccaaaataactgataatgaaac 1914

                                                                        
Query: 147  atggatggctaatattatattcaatataatatttcagttttatacattccattttgacac 206
            ||  ||||  ||||| |||||| ||||||||||||||| ||||||| || || | |||||
Sbjct: 1915 attaatggggaatatgatattcgatataatatttcagtgttatacaatcaatatagacac 1974

                                                                        
Query: 207  actccccaaatttatcgaagttatgtcatggaatgattggactgatggtatttttggaac 266
            ||||||||| || |||||| | || |||||||||||||||||||||||||||||||||||
Sbjct: 1975 actccccaagttaatcgaaataatatcatggaatgattggactgatggtatttttggaac 2034

                                                                        
Query: 267  cttgaaaactttcaatgttgattctcaattagtcggtttgttgtgtctcttcaatgtgtg 326
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 cttgaaaactgtcaatgttgattctcaattagtcggtttgttgtgtctcttcaatgtgtg 2094

                                                                        
Query: 327  gagtgtcatccctgtcactcatcgtaaacgggtggttactactattatcgacgagttatg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2095 gagtgtcatccctgtcactcatcgtaaacgggtggttactactattatcgacgagttatg 2154

                                                                        
Query: 387  gaatctactgtctgttgatactgacttccacatcataagcattctttttcat-aattact 445
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2155 gaatctactgtctgttgatactgacttccacatcataagcattctttttcataaattact 2214

                                                                        
Query: 446  ccgggtc-aaatactcccggattaagatctttc-acggatcagattc-tgccctc-aaca 501
            |  | || |||||||||||||| |||||||||| ||||||||||||| |||| || ||||
Sbjct: 2215 cgtgttcaaaatactcccggataaagatctttcaacggatcagattcatgccatcaaaca 2274

                                                                        
Query: 502  taaattctatgcc--taattaagagggttggc-aattattaacg-tttgaactgggactt 557
            |||||||||||||   ||| |||||| ||||| ||||||||||| ||||||||| |||| 
Sbjct: 2275 taaattctatgccataaataaagaggtttggcaaattattaacgttttgaactgtgacta 2334

                                                  
Query: 558  ccctgaattttttgatga-aaaacggttttatttttcc 594
            | |||||||  ||||||| |||||||| ||||||||||
Sbjct: 2335 cactgaattagttgatgagaaaacggtattatttttcc 2372


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7078
Number of Sequences: 1807
Number of extensions: 7078
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)