BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZF03FM1.SCF screened BAC_end (979 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1706 1285 0.0 >3x_Contig1706 Length = 16303 Score = 1285 bits (648), Expect = 0.0 Identities = 741/767 (96%), Gaps = 4/767 (0%) Strand = Plus / Minus Query: 84 gcttctcacaatcagtagaggcatagtaacatacctcgggaagcgtataatgtctcaatc 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1590 gcttctcacaatcagtagaggcatagtaacatacctcgggaagcgtataatgtctcaatc 1531 Query: 144 gctcatactactattcatgttgtttgtcgtaaaatattccgacaaatctattgatctagc 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1530 gctcatactactattcatgttgtttgtcgtaaaatattccgacaaatctattgatctagc 1471 Query: 204 tctagataaagtagactcccgtcattcttcatggatatctaaactaattcagttattaag 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 tctagataaagtagactcccgtcattcttcatggatatctaaactaattcagttattaag 1411 Query: 264 ccaattcacagggataagtaaggtcagtctacaagttcaataattaagtaaataagtcat 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1410 ccaattcacagggataagtaaggtcagtctacaagttcaataattaagtaaataagtcat 1351 Query: 324 cgcgtcctactagccatacacctagagtggtgaggaactgaattatatgcatttaagtaa 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1350 cgcgtcctactagccatacacctagagtggtgaggaactgaattatatgcatttaagtaa 1291 Query: 384 tgactctttatcggcgttcctattcctatttacttttttctttttgaacaagtcatctca 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1290 tgactctttatcggcgttcctattcctatttacttttttctttttgaacaagtcatctca 1231 Query: 444 tctcatctcttgttctgttgaattgtacggagttcattaaaacaagtgccttagtacaac 503 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1230 tctcatctcttgttctgttgaattgtacggggttcattaaaacaagtgccttagtacaac 1171 Query: 504 gtagatattcgaagtgaaatggaaactaaagtaagcagctgggtgctaaagatcgcattt 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 gtagatattcgaagtgaaatggaaactaaagtaagcagctgggtgctaaagatcgcattt 1111 Query: 564 caagaaattgatggtatagcataatgtcgaaatacagatggcgaganttgattgatttga 623 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1110 caggaaattgatggtatagcataatgtcgaaatacagatggcgagatttgattgatttga 1051 Query: 624 atgaccaagagaagagctttctttctccattagcatgcattgcacacattgatgttcatg 683 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1050 atgacaaagagaagagctttctttctccattagcatgcattgcacacattgatgtcaatg 991 Query: 684 ccctttttgcacaggtagaacaagtacgatgcggtttttcaagggatgatcccgtagttg 743 || ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 990 ccttttttgcacaggtagaacaggtacgatgcggtttttcaagggatgatccggtagttg 931 Query: 744 cagtacaattggactagtatttttatccgtttcttatgccagttcgaaagttatattgtg 803 |||||||| |||||||||| ||||| |||||||||||| ||| ||||||| |||| |||| Sbjct: 930 cagtacaa-tggactagta-ttttagccgtttcttatg-cagctcgaaag-tataatgtg 875 Query: 804 tcccgctttgaaagcttacctgatggcaataaaaagggtgataaaat 850 |||||| | || ||| ||| ||||| | |||||| |||||||||| Sbjct: 874 tcccgcatggagagcatacttgatgcgataaaaaagtgtgataaaat 828 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7641 Number of Sequences: 1807 Number of extensions: 7641 Number of successful extensions: 317 Number of sequences better than 1.0e-20: 1 length of query: 979 length of database: 10,358,551 effective HSP length: 16 effective length of query: 963 effective length of database: 10,329,639 effective search space: 9947442357 effective search space used: 9947442357 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)