BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZF09FM1.SCF screened BAC_end (968 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1381 1195 0.0 >3x_Contig1381 Length = 7318 Score = 1195 bits (603), Expect = 0.0 Identities = 650/663 (98%), Gaps = 2/663 (0%) Strand = Plus / Minus Query: 88 tgctctaggtagagaagtgctagatgttgcggccgccgcagttagaccaggtatcactac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1893 tgctctaggtagagaagtgctagatgttgcggccgccgcagttagaccaggtatcactac 1834 Query: 148 ggatgaaattgatgagatagtgcataacgagactatcaagaggggagcatacccatctcc 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1833 ggatgaaattgatgagatagtgcataacgagactatcaagaggggagcatacccatctcc 1774 Query: 208 tctcaactactataatttccctaaatccgtctgtacttctgtgaacgagattatctgtca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1773 tctcaactactataatttccctaaatccgtctgtacttctgtgaacgagattatctgtca 1714 Query: 268 tggtgttcctgacaaatatgttctaaaagagggagatattgtcaatttagatgtctcatt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1713 tggtgttcctgacaaatatgttctaaaagagggagatattgtcaatttagatgtctcatt 1654 Query: 328 gtattaccaaggcatgcatgcagatttaaacgaaacttactacgttggtgagactatcgc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1653 gtattaccaaggcatgcatgcagatttaaacgaaacttactacgttggtgagactatcgc 1594 Query: 388 caaggatgtcataaataccgttgaaactgcccgtgaatgtttgaaactcgccatcaagat 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1593 caaggatgtcataaataccgttgaaactgcccgtgaatgtttgaaactcgccatcaagat 1534 Query: 448 gtgtaaaccaggcgtaacttttcaatccttgggagactgcattgaaaagcactccaaatc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1533 gtgtaaaccaggcgtaacttttcaatccttgggagactgcattgaaaagcactccaaatc 1474 Query: 508 caacaaatgctctgttgttaggacttactgtggtcatggtgtcagtgagtttttccactg 567 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1473 caacaaatgctctgttgttaggacttactgtggtcatggtgtcggtgagtttttccactg 1414 Query: 568 tgcccccagcattccacattatgctaacaacagaacgcccggtgtcatgatacctggaat 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1413 tgcccccagcattccacattatgctaacaacagaacgcccggtgtcatgaaacctggaat 1354 Query: 628 gggtctcactatagaacctatgattaacgaaagtgtatggcatgatatcaccctggcctg 687 || |||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| Sbjct: 1353 ggtcttcactatagaacctatgattaacgaaggtgtatggcaagatatca-cctggcctg 1295 Query: 688 acgattggacttctttcacaaaggat-gttaagttagtgctcattttgagcaaacccttt 746 ||||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||| Sbjct: 1294 acgattggacttcttcaacaaaggatggtaaagttagtgctcagtttgagcaaacccttt 1235 Query: 747 tgg 749 ||| Sbjct: 1234 tgg 1232 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5609 Number of Sequences: 1807 Number of extensions: 5609 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 1 length of query: 968 length of database: 10,358,551 effective HSP length: 16 effective length of query: 952 effective length of database: 10,329,639 effective search space: 9833816328 effective search space used: 9833816328 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)