BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC42ZG02RM1.SCF screened BAC_end
         (913 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig829                                                         1251   0.0  

>3x_Contig829 
          Length = 2277

 Score = 1251 bits (631), Expect = 0.0
 Identities = 817/866 (94%), Gaps = 10/866 (1%)
 Strand = Plus / Plus

                                                                        
Query: 51   gcttctattcatggacctatcaccttagaaattgcctctgatgtggaaagcagttttata 110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792  gcttctattcatggacctatcaccttagaaattgcctctgatgtggaaagcagttttata 851

                                                                        
Query: 111  aaaaaggcagactgtgacactttcacagtcagctattttccaacaaataatggctggcga 170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852  aaaaaggcagactgtgacactttcacagtcagctattttccaacaaataatggctggcga 911

                                                                        
Query: 171  cagtatacccaaaacaggactcatgccgaagaaagagtaatgaacaatagtattttcttt 230
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 912  cagtatacccaaaacaggactcatgccgaagaaagagtaatgaacaatagtattttcaaa 971

                                                                        
Query: 231  actgacgaaaccaggattgaccatacagatcacagtgtttcagctgattatccacatctg 290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972  actgacgaaaccaggattgaccatacagatcacagtgtttcagctgattatccacatctg 1031

                                                                        
Query: 291  aaatcttcattaaaagacgaatctgtcgaatatttttcaaatgatcaatctttcgttcga 350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 aaatcttcattaaaagacgaatctgtcgaatatttttcaaatgatcaatctttcgttcga 1091

                                                                        
Query: 351  tatattgatgccaggttcgattcagaaagtataggatctacaaattcgtcagagaaacaa 410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 tatattgatgccaggttcgattcagaaagtataggatctacaaattcgtcagagaaacaa 1151

                                                                        
Query: 411  actctctgttcttcaatcaacacaagcaaaatcatttatccaagtatggctggagctcag 470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 actctctgttcttcaatcaacacaagcaaaatcatttatccaagtatggctggagctcag 1211

                                                                        
Query: 471  tttgatggtgatccaatgcctcttttagatcatccgaatttgacacacttcagtggtttt 530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 tttgatggtgatccaatgcctcttttagatcatccgaatttgacacacttcagtggtttt 1271

                                                                        
Query: 531  ttggctgaaaatgattctgttgaaccttctcttg-aaatgac-aggacatgcagacagat 588
            |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| 
Sbjct: 1272 ttggctgaaaatgattctgttgaaccttctcttgaaaatgacaaggacatgcagacagaa 1331

                                                                        
Query: 589  aacttgtctaatacgatcaattcatctgacactacgaagaaaattctagcttgggaatat 648
            |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||
Sbjct: 1332 aacttgtctaatacgatcaattcatctgacactacgaagaaattcttagcttgggaatat 1391

                                                                        
Query: 649  aaggatgataaaattgntaaaagtcccgggtacccctccaaatgaagattacgttgaatg 708
            |||||||||||| ||| | ||||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 1392 aaggatgataaatttgtt-aaagtaccgtgtacccctccaaatgaagataacgttgaatg 1450

                                                                        
Query: 709  ggacatggatcactggcattactacaaacatttcttactaaaggaaaaggtggaaaaaaa 768
            |||||| |||||||| |||||||||||||| |||| |||||||||||| || ||||||||
Sbjct: 1451 ggacattgatcactgtcattactacaaacaattctcactaaaggaaaa-gttgaaaaaaa 1509

                                                                        
Query: 769  aacggtaccccgcagcggaaaaga-ggactccctgggggagaaattactaccttaaagga 827
            ||||||  | ||||||||| |||| | ||| |||||| |||| || |||| |||||||||
Sbjct: 1510 aacggttacgcgcagcggagaagatgtact-cctgggtgagacataacta-cttaaagga 1567

                                                                        
Query: 828  ctccggctc-ttttaaaaggattaaatgcctaataccggtttattaagaaaaattcaatt 886
            ||||| ||| | |||||  |||||| ||| ||||| | | |||| |  ||| |||| |||
Sbjct: 1568 ctccgtctcatattaaagtgattaagtgcataata-ctgattatcagtaaatattctatt 1626

                                      
Query: 887  tttccttatgggaaattaagttatcc 912
            ||| ||||| ||||||||||||||||
Sbjct: 1627 ttt-cttattggaaattaagttatcc 1651


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7591
Number of Sequences: 1807
Number of extensions: 7591
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)