BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZG02RM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig829 1251 0.0 >3x_Contig829 Length = 2277 Score = 1251 bits (631), Expect = 0.0 Identities = 817/866 (94%), Gaps = 10/866 (1%) Strand = Plus / Plus Query: 51 gcttctattcatggacctatcaccttagaaattgcctctgatgtggaaagcagttttata 110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 gcttctattcatggacctatcaccttagaaattgcctctgatgtggaaagcagttttata 851 Query: 111 aaaaaggcagactgtgacactttcacagtcagctattttccaacaaataatggctggcga 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 852 aaaaaggcagactgtgacactttcacagtcagctattttccaacaaataatggctggcga 911 Query: 171 cagtatacccaaaacaggactcatgccgaagaaagagtaatgaacaatagtattttcttt 230 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 912 cagtatacccaaaacaggactcatgccgaagaaagagtaatgaacaatagtattttcaaa 971 Query: 231 actgacgaaaccaggattgaccatacagatcacagtgtttcagctgattatccacatctg 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 actgacgaaaccaggattgaccatacagatcacagtgtttcagctgattatccacatctg 1031 Query: 291 aaatcttcattaaaagacgaatctgtcgaatatttttcaaatgatcaatctttcgttcga 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 aaatcttcattaaaagacgaatctgtcgaatatttttcaaatgatcaatctttcgttcga 1091 Query: 351 tatattgatgccaggttcgattcagaaagtataggatctacaaattcgtcagagaaacaa 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1092 tatattgatgccaggttcgattcagaaagtataggatctacaaattcgtcagagaaacaa 1151 Query: 411 actctctgttcttcaatcaacacaagcaaaatcatttatccaagtatggctggagctcag 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1152 actctctgttcttcaatcaacacaagcaaaatcatttatccaagtatggctggagctcag 1211 Query: 471 tttgatggtgatccaatgcctcttttagatcatccgaatttgacacacttcagtggtttt 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1212 tttgatggtgatccaatgcctcttttagatcatccgaatttgacacacttcagtggtttt 1271 Query: 531 ttggctgaaaatgattctgttgaaccttctcttg-aaatgac-aggacatgcagacagat 588 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 1272 ttggctgaaaatgattctgttgaaccttctcttgaaaatgacaaggacatgcagacagaa 1331 Query: 589 aacttgtctaatacgatcaattcatctgacactacgaagaaaattctagcttgggaatat 648 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 1332 aacttgtctaatacgatcaattcatctgacactacgaagaaattcttagcttgggaatat 1391 Query: 649 aaggatgataaaattgntaaaagtcccgggtacccctccaaatgaagattacgttgaatg 708 |||||||||||| ||| | ||||| ||| |||||||||||||||||||| |||||||||| Sbjct: 1392 aaggatgataaatttgtt-aaagtaccgtgtacccctccaaatgaagataacgttgaatg 1450 Query: 709 ggacatggatcactggcattactacaaacatttcttactaaaggaaaaggtggaaaaaaa 768 |||||| |||||||| |||||||||||||| |||| |||||||||||| || |||||||| Sbjct: 1451 ggacattgatcactgtcattactacaaacaattctcactaaaggaaaa-gttgaaaaaaa 1509 Query: 769 aacggtaccccgcagcggaaaaga-ggactccctgggggagaaattactaccttaaagga 827 |||||| | ||||||||| |||| | ||| |||||| |||| || |||| ||||||||| Sbjct: 1510 aacggttacgcgcagcggagaagatgtact-cctgggtgagacataacta-cttaaagga 1567 Query: 828 ctccggctc-ttttaaaaggattaaatgcctaataccggtttattaagaaaaattcaatt 886 ||||| ||| | ||||| |||||| ||| ||||| | | |||| | ||| |||| ||| Sbjct: 1568 ctccgtctcatattaaagtgattaagtgcataata-ctgattatcagtaaatattctatt 1626 Query: 887 tttccttatgggaaattaagttatcc 912 ||| ||||| |||||||||||||||| Sbjct: 1627 ttt-cttattggaaattaagttatcc 1651 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7591 Number of Sequences: 1807 Number of extensions: 7591 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)