BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZG03RM1.SCF screened BAC_end (898 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1107 1588 0.0 >3x_Contig1107 Length = 6096 Score = 1588 bits (801), Expect = 0.0 Identities = 849/857 (99%), Gaps = 6/857 (0%) Strand = Plus / Minus Query: 44 cttgtttgtttttcaattcatcaaatcttccattggatttcgataatggcgtactaaatt 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1875 cttgtttgtttttcaattcatcaaatcttccattggatttcgataatggcgtactaaatt 1816 Query: 104 tgtccaggtgatcaacatcatcgatcttaaagatgtcaggacaaaactcattcaagtttg 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1815 tgtccaggtgatcaacatcatcgatcttaaagatgtcaggacaaaactcattcaagtttg 1756 Query: 164 ttaggtccaaagtgtaaataatggtaccggctcccatgtcgacatcagaagtgcttacat 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1755 ttaggtccaaagtgtaaataatggtaccggctcccatgtcgacatcagaagtgcgtacat 1696 Query: 224 cggtgctgttaccaacagcataatcaaacttgtcaccacccatgattagcagtttattat 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1695 cggtgctgttaccaacagcataatcaaacttgtcaccacccatgattagcagtttattat 1636 Query: 284 ttgataacagagtgagagagtgtccggatcttgctcttggaatcatattattaaaagttg 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1635 ttgataacagagtgagagagtgtccggatcttgctcttggaatcatattattaaaagttg 1576 Query: 344 gtagtttgaaccattttagactcctgaagtttaagaaatacacggcgtttgaataattgt 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1575 gtagtttgaaccattttagactcctgaagtttaagaaatacacggcgtttgaataattgt 1516 Query: 404 cctgcgcatccttcccaccaaaaacacacattaaatcgcggtatatgatagcagcatgct 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1515 cctgcgcatccttcccaccaaaaacacacattaaatcgcggtatatgatagcagcatgct 1456 Query: 464 cttgtaatggcggtgggatgtttcctgtagtctgcactacacaccaatcattggcagctg 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1455 cttgtaatggcggtgggatgtttcctgtagtctgcactacacaccaatcattggcagctg 1396 Query: 524 gatcaaacataaagacttcgttagttaaaccttgaggagtatcaccaccaaatacccaca 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1395 gatcaaacataaagacttcgttagttaaaccttgaggagtatcaccaccaaatacccaca 1336 Query: 584 acttatgatcaaacgagatcatcgtgtggttagccaagggtggtggcatgaaagttgccg 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 acttatgatcaaacgagatcatcgtgtggttagccaagggtggtggcatgaaagttgccg 1276 Query: 644 gtttaataaattcccagtgagaatcagatctccggaaagatgagaggtcaaactctgcta 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 gtttaataaattcccagtgagaatcagatctccggaaagatgagaggtcaaactctgcta 1216 Query: 704 aatcattaaaataggtatcatcaaactgaccaccaaacacataaagtttgggttttcatt 763 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1215 aatcattaaaataggtatcatcaaactgaccaccaaacacataaagttt-ggttttca-t 1158 Query: 764 ttggttcgcagcaattatactgattttgtgaccgtatctaccaagtgggtcta-gtcctt 822 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1157 ttggttcgcagcaattatactgattttgtgaccgtatctaccaagt-ggtctaggtcctt 1099 Query: 823 gaggtgttggtatggtccatttgttgaaagttgatattgaacaaatat-tgtcatcgtcc 881 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 1098 gaggtgttggtatggtccatttg-tgagagttgatattgaacaaatatatgtcatcgtcc 1040 Query: 882 atcaaaccggcatcatt 898 ||||||||||||||||| Sbjct: 1039 atcaaaccggcatcatt 1023 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6538 Number of Sequences: 1807 Number of extensions: 6538 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 898 length of database: 10,358,551 effective HSP length: 16 effective length of query: 882 effective length of database: 10,329,639 effective search space: 9110741598 effective search space used: 9110741598 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)