BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZG06RM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1433 1283 0.0 >3x_Contig1433 Length = 8270 Score = 1283 bits (647), Expect = 0.0 Identities = 806/848 (95%), Gaps = 11/848 (1%) Strand = Plus / Plus Query: 47 tacagtccatttacatggacgattttacagacttaactaaacgacattcatcttgggata 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2372 tacagtccatttacatggacgattttacagacttaactaaacgacattcatcttgggata 2431 Query: 107 aacatccacagatcatatttgagataggtttaaggtctcaagaatctgatcctgctgaat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2432 aacatccacagatcatatttgagataggtttaaggtctcaagaatctgatcctgctgaat 2491 Query: 167 gctcattgaatttgcatgtagttctcccgtctacttatcctcatgcagctcctcagatta 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2492 gctcattgaatttgcatgtagttctcccgtctacttatcctcatgcagctcctcagatta 2551 Query: 227 cattcaagaatgtaataaatgtgccagatggccaactgaataagctcaggcaggaaatca 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2552 cattcaagaatgtaataaatgtgccagatggccaactgaataagctcaggcaggaaatca 2611 Query: 287 aagaaatacatcaaagatctaaagggcaagaaatcatatatgaaatcattattgcaacgc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2612 aagaaatacatcaaagatctaaagggcaagaaatcatatatgaaatcattattgcaacgc 2671 Query: 347 aagatgtcctataagattcgcagaaacatgtggtaactgattctttataggatcagaggc 406 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2672 aagatgtcctagaagattcgcagaaacatgtggtaactgattctttagaggatcagaggc 2731 Query: 407 tgcagcggatcagagatgaagaggctcgaatgaaactcgaagaagagcaaagacaaaaaa 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2732 tgcagcggatcagagatgaagaggctcgaatgaaactcgaagaagagcaaagacaaaaaa 2791 Query: 467 tgattgaaaaacagaagatgcaggaacagaaattgattgacgaagtgttccaaaaagaac 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2792 tgattgaaaaacagaagatgcaggaacagaaattgattgacgaagtgttccaaaaagaac 2851 Query: 527 tagctaagagaatggatgatgaagtgctcgaattcagtaacgataaggagattgatttat 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2852 tagctaagagaatggatgatgaagtgctcgaattcagtaacgataaggagattgatttat 2911 Query: 587 tgccgcctgccgaattgacctcttcggagcaggcgttcgttttttcacatctcatcacag 646 ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 2912 tgccgcctgccgaattgacctcttcggggcaggcgttcgtttttccacaactcatcacag 2971 Query: 647 canagctacctaaatactcgcagtataaattcagagctgntatacaacctcnanttcatt 706 || |||||||||| |||||||||||||||||||||||| ||||||||||| | | Sbjct: 2972 caaagctacctaataactcgcagtataaattcagagctgttatacaacctcaatcaatta 3031 Query: 707 atttatgttgacgatcccgctatctttcgcatccaanatgctngntnaatccatttattt 766 ||||||| ||||||| |||||||||||||||||| | ||||| | | || ||||||| || Sbjct: 3032 atttatg-tgacgat-ccgctatctttcgcatcccagatgcttgttaaa-ccattta-tt 3087 Query: 767 ccgnctgaatcaccactatattatngttttgaaattcttcgggatcaacttgacagccat 826 ||| ||||||||||||||||| || ||||||||| ||||| ||||||||||||||| ||| Sbjct: 3088 ccggctgaatcaccactatataat-gttttgaaa-tcttc-ggatcaacttgacag-cat 3143 Query: 827 tcattactttttgnaacgaagttgatatttggacaatccatacttncattcaggcaatgg 886 ||| ||| ||||| | |||| ||||| ||||||||||||||||| || || ||||||| Sbjct: 3144 tcaataccttttgaca-gaag-tgata-ttggacaatccatacttcaatacaagcaatgg 3200 Query: 887 taaaaagg 894 |||||||| Sbjct: 3201 taaaaagg 3208 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6150 Number of Sequences: 1807 Number of extensions: 6150 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 1 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)