BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZG12FM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1791 1086 0.0 >3x_Contig1791 Length = 39945 Score = 1086 bits (548), Expect = 0.0 Identities = 626/643 (97%), Gaps = 7/643 (1%) Strand = Plus / Minus Query: 86 caagagtttaacgtatatatcaagtctttcgttttgatatgagaccatttctattctttt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20127 caagagtttaacgtatatatcaagtctttcgttttgatatgagaccatttctattctttt 20068 Query: 146 tattataccattgacatgatcgattaagtttgatctagtctttgttgataagggtaccgt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20067 tattataccattgacatgatcgattaagtttgatctagtctttgttgataagggtaccgt 20008 Query: 206 gtcaaggtatatgttaagctgtgagtgtagcgaataccatttcgacatattctgttcatg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20007 gtcaaggtatatgttaagctgtgagtgtagcgaataccatttcgacatattctgttcatg 19948 Query: 266 gttacttttcagctttagtattttatcttctactgatgtccttctttgtaccacaaatgt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19947 gttacttttcagctttagtattttatcttctactgatgtccttctttgtaccacaaatgt 19888 Query: 326 attacgcagtccggcgatttctatttcacatccatcgatgctgccggagaaataaataga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19887 attacgcagtccggcgatttctatttcacatccatcgatgctgccggagaaataaataga 19828 Query: 386 gtttttccaggctaatgcctctgttctattcctaaacattatatcacgtttttggctttg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19827 gtttttccaggctaatgcctctgttctattcctaaacattatatcacgtttttggctttg 19768 Query: 446 attcacaatggataaaacattggggtcagtattcttgttttccgttaagaataagttgtt 505 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 19767 attcacaatggataaaacattggggtcagtattcttgttttccgttaagaataggttgtt 19708 Query: 506 acaatattccatttcgtacagcgaagaaagcggttgagataaatcaataatgtaatttga 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19707 acaatattccatttcgtacagcgaagaaagcggttgagataaatcaataatgtaatttga 19648 Query: 566 ggtctttagtta-ttcatctagttcgatctttggatccagccaggacatgctttcaaag- 623 |||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 19647 ggtctt-agttaattcatctagttcgatctttggatccagccaggacatgctatcaaaga 19589 Query: 624 aaaattggaaggaagttgtcaatatcgcaaacttagttttttcaatgattctttatnaca 683 ||||| |||||||||| ||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 19588 aaaataggaaggaagtagtcaatatcgcaaacttag-tcttccaatgattctttaccaca 19530 Query: 684 ttttcctacaaaagagaaactttcttggactgaactttcattt 726 |||||||||| |||| |||||||||| |||| |||||||||| Sbjct: 19529 -tttcctacaagagag-aactttcttgtactg-actttcattt 19490 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,813 Number of Sequences: 1807 Number of extensions: 15813 Number of successful extensions: 117 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)