BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZH07RM1.SCF screened BAC_end (893 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1768 1031 0.0 >3x_Contig1768 Length = 25668 Score = 1031 bits (520), Expect = 0.0 Identities = 578/588 (98%), Gaps = 7/588 (1%) Strand = Plus / Minus Query: 44 gctttcagtaccagaagttcaagatgacgacaaaaatagcaaggtgcgcaacaggaaaca 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23468 gctttcagtaccagaagttcaagatgacgacaaaaatagcaaggtgcgcaacaggaaaca 23409 Query: 104 tcagcgatttgatttagaagagaagaagaaaaagctgaggctgcagaagactatagaaga 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23408 tcagcgatttgatttagaagagaagaagaaaaagctgaggctgcagaagactatagaaga 23349 Query: 164 acaaataaaacatcatgatattgaaatgacagctaatagagtcgtgaatgttgaccatgt 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23348 acaaataaaacatcatgatattgaaatgacagctaatagagtcgtgaatgttgaccatgt 23289 Query: 224 tgtcaggcaacattataatgagcgtacgtttctttccaaaaagcataacagaaattattc 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23288 tgtcaggcaacattataatgagcgtacgtttctttccaaaaagcataacagaaattattc 23229 Query: 284 tcctatcattaaacttagaaactttaataatgctatcaagtacattctcattgacaagtt 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23228 tcctatcattaaacttagaaactttaataatgctatcaagtacattctcattgacaagtt 23169 Query: 344 tacaagagcaggagatgtagtcttggagcttgcctgtggntaaaggtggtgatttaagga 403 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 23168 tacaagagcaggagatgtagtcttggagcttgcctgtgg-taaaggtggtgatttaagga 23110 Query: 404 aatatggtgccgcaggaatatcacagtttattggtattgacatttccaatgcttcaatta 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23109 aatatggtgccgcaggaatatcacagtttattggtattgacatttccaatgcttcaatta 23050 Query: 464 ccgatgcgcttaaacgttatcattcgatgaagaaaccttg-ataccaagttattctaatt 522 |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 23049 ccgaggcgcttaaacgttatcattcgatgaag-aaccttgaataccaagttattctaatt 22991 Query: 523 actgggtgattgttttgttgagtcccttggggtcgcagttgaattatt-ccagaatgcag 581 ||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 22990 act-ggtgattgttttggtgagtcccttggggtcgcagttgaatcattcccagaatgcag 22932 Query: 582 atttcc-tgtgacatagtgtcatgtcaatt-gctctacattatgcgtt 627 |||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22931 atttccttgtgacatagtgtcatgtcaattcgctctacattatgcgtt 22884 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8530 Number of Sequences: 1807 Number of extensions: 8530 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 893 length of database: 10,358,551 effective HSP length: 16 effective length of query: 877 effective length of database: 10,329,639 effective search space: 9059093403 effective search space used: 9059093403 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)