BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC42ZH09RM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig985 1433 0.0 >3x_Contig985 Length = 5529 Score = 1433 bits (723), Expect = 0.0 Identities = 862/893 (96%), Gaps = 13/893 (1%) Strand = Plus / Plus Query: 49 cttataaatttgaca-gaaca-gccgattgtggggcaatgtcaagtgttagagaaaaaat 106 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4328 cttataaatttgacaagaacaagccgattgtggggcaatgtcaagtgttagagaaaaaat 4387 Query: 107 atttaagacttacttctgaaccagatccggcaaaagtacgcccgttgtccattttaatta 166 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4388 atttaagacttacttctgaaccagatccggcaaaagtacgcccgttgtccatgttaatta 4447 Query: 167 aagctcttgactggattgtgaccaagtttcatagcggttcgtgctcttatcagtattttt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4448 aagctcttgactggattgtgaccaagtttcatagcggttcgtgctcttatcagtatttct 4507 Query: 227 gtgatcagttgaaatctataaggcaggacttgaaagtgcaaatgatcgagaatgatttta 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4508 gtgatcagttgaaatctataaggcaggacttgaaagtgcaaatgatcgagaatgatttta 4567 Query: 287 ctgttactgtttataagacgcatgcacgcgcagctcttgagaacggagatgtcggtgaat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4568 ctgttactgtttataagacgcatgcacgcgcagctcttgagaacggagatgtcggtgaat 4627 Query: 347 ataatcaatgtcaaagtagtttgaagcctttgtttgaaaaagataacatttgacaagagc 406 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4628 ataatcaatgtcaaagtagtttgaagcctttgtttgaaaaagataaca-ttgacaagagc 4686 Query: 407 -gacttgcccgaattcatcagttacagaatactctaccacatgatgacctcggaccattc 465 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4687 ggacttgcccgaattcatcagttacagaatactctaccacatgatgacctcggaccattc 4746 Query: 466 cagcattaatcagttgcacttccaactcctaactaccctaagtcatatgtatgacaatga 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4747 cagcattaatcagttgcacttccaactcctaactaccctaagtcatatgtatgacaatga 4806 Query: 526 aatgatacaaagagcattaaaaatgtctgaagcacagattgaaaataactatcatacctt 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4807 aatgatacaaagagcattaaaaatgtctgaagcacagattgaaaataactatcatacctt 4866 Query: 586 catgagaatntatcaacaaacaaagggcccggagcgccatttagttaatcaattcattaa 645 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4867 catgagaatttatcaacaaacaaagggcccggagcgccatttagttaatcaattcattaa 4926 Query: 646 aaaggagagattaaacgcattgaattgcatgtgtaaagcttatgcaagacttncgttgca 705 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4927 aaaggagagattaaacgcattgaattgcatgtgtaaagcttatgcaagacttccgttgca 4986 Query: 706 tttcttggcacctgaacttcatttc-atgatgncacagaagccttcgaaaattct-acgg 763 |||||||||||||||||||||||| |||||| ||||||||||||| || |||| |||| Sbjct: 4987 attcttggcacctgaacttcatttcaatgatgcaacagaagccttcg-aatttctaacgg 5045 Query: 764 annctgagct-atccagtttatggttgtgcccggaagcgaccccaacgagatctttctcg 822 | |||||| |||||||||||||||||||| | |||||||||||||||||||| ||||| Sbjct: 5046 aacttgagctaatccagtttatggttgtgccggaaagcgaccccaacgagatctatctcg 5105 Query: 823 attgt-aaagctgccgttctac-atcatt-aacatttcggcgatgctaggagaattgaca 879 ||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||||||| Sbjct: 5106 attgtaaaagctgccgttctacaatcattaaacatttcggcgatgctagaagaattgaca 5165 Query: 880 tcaagggacanatttaagttggtttcgaag-atttctcgtatgattcggctaa 931 |||||||||| ||||||||| ||||||||| || |||||||||||| |||||| Sbjct: 5166 tcaagggacaaatttaagtt-gtttcgaagaatatctcgtatgattaggctaa 5217 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6291 Number of Sequences: 1807 Number of extensions: 6291 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)