BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC42ZH09RM1.SCF screened BAC_end
         (971 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig985                                                         1433   0.0  

>3x_Contig985 
          Length = 5529

 Score = 1433 bits (723), Expect = 0.0
 Identities = 862/893 (96%), Gaps = 13/893 (1%)
 Strand = Plus / Plus

                                                                        
Query: 49   cttataaatttgaca-gaaca-gccgattgtggggcaatgtcaagtgttagagaaaaaat 106
            ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4328 cttataaatttgacaagaacaagccgattgtggggcaatgtcaagtgttagagaaaaaat 4387

                                                                        
Query: 107  atttaagacttacttctgaaccagatccggcaaaagtacgcccgttgtccattttaatta 166
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4388 atttaagacttacttctgaaccagatccggcaaaagtacgcccgttgtccatgttaatta 4447

                                                                        
Query: 167  aagctcttgactggattgtgaccaagtttcatagcggttcgtgctcttatcagtattttt 226
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4448 aagctcttgactggattgtgaccaagtttcatagcggttcgtgctcttatcagtatttct 4507

                                                                        
Query: 227  gtgatcagttgaaatctataaggcaggacttgaaagtgcaaatgatcgagaatgatttta 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4508 gtgatcagttgaaatctataaggcaggacttgaaagtgcaaatgatcgagaatgatttta 4567

                                                                        
Query: 287  ctgttactgtttataagacgcatgcacgcgcagctcttgagaacggagatgtcggtgaat 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4568 ctgttactgtttataagacgcatgcacgcgcagctcttgagaacggagatgtcggtgaat 4627

                                                                        
Query: 347  ataatcaatgtcaaagtagtttgaagcctttgtttgaaaaagataacatttgacaagagc 406
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4628 ataatcaatgtcaaagtagtttgaagcctttgtttgaaaaagataaca-ttgacaagagc 4686

                                                                        
Query: 407  -gacttgcccgaattcatcagttacagaatactctaccacatgatgacctcggaccattc 465
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4687 ggacttgcccgaattcatcagttacagaatactctaccacatgatgacctcggaccattc 4746

                                                                        
Query: 466  cagcattaatcagttgcacttccaactcctaactaccctaagtcatatgtatgacaatga 525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4747 cagcattaatcagttgcacttccaactcctaactaccctaagtcatatgtatgacaatga 4806

                                                                        
Query: 526  aatgatacaaagagcattaaaaatgtctgaagcacagattgaaaataactatcatacctt 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4807 aatgatacaaagagcattaaaaatgtctgaagcacagattgaaaataactatcatacctt 4866

                                                                        
Query: 586  catgagaatntatcaacaaacaaagggcccggagcgccatttagttaatcaattcattaa 645
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4867 catgagaatttatcaacaaacaaagggcccggagcgccatttagttaatcaattcattaa 4926

                                                                        
Query: 646  aaaggagagattaaacgcattgaattgcatgtgtaaagcttatgcaagacttncgttgca 705
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4927 aaaggagagattaaacgcattgaattgcatgtgtaaagcttatgcaagacttccgttgca 4986

                                                                        
Query: 706  tttcttggcacctgaacttcatttc-atgatgncacagaagccttcgaaaattct-acgg 763
             |||||||||||||||||||||||| ||||||  ||||||||||||| || |||| ||||
Sbjct: 4987 attcttggcacctgaacttcatttcaatgatgcaacagaagccttcg-aatttctaacgg 5045

                                                                        
Query: 764  annctgagct-atccagtttatggttgtgcccggaagcgaccccaacgagatctttctcg 822
            |   |||||| |||||||||||||||||||| | |||||||||||||||||||| |||||
Sbjct: 5046 aacttgagctaatccagtttatggttgtgccggaaagcgaccccaacgagatctatctcg 5105

                                                                        
Query: 823  attgt-aaagctgccgttctac-atcatt-aacatttcggcgatgctaggagaattgaca 879
            ||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||
Sbjct: 5106 attgtaaaagctgccgttctacaatcattaaacatttcggcgatgctagaagaattgaca 5165

                                                                 
Query: 880  tcaagggacanatttaagttggtttcgaag-atttctcgtatgattcggctaa 931
            |||||||||| ||||||||| ||||||||| || |||||||||||| ||||||
Sbjct: 5166 tcaagggacaaatttaagtt-gtttcgaagaatatctcgtatgattaggctaa 5217


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6291
Number of Sequences: 1807
Number of extensions: 6291
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)