BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZA02RM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1749 1386 0.0 >3x_Contig1749 Length = 22923 Score = 1386 bits (699), Expect = 0.0 Identities = 851/880 (96%), Gaps = 18/880 (2%) Strand = Plus / Minus Query: 50 ggtttacaaagcgatttattcattccccttatgaaagtagctgcactgtttgaaatacag 109 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 13262 ggtttacaaagcgatttatt-attccccttatgaaagtagctgcactgtttgaaatacag 13204 Query: 110 cgaaccgaaacacgaatacagtgcagcaaattcccctatagcagtatggtgggctccatt 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13203 cgaaccgaaacacgaatacagtgcagcaaattcccctatagcagtatggtgggctccatt 13144 Query: 170 gccttatgaaccaagctatccttactggcctgacggatataccccaagtgtatcctgtag 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13143 gccttatgaaccaagctatccttactggcctgacggatataccccaagtgtatcctgtag 13084 Query: 230 tgccatgttctaaggtatgcagatttccgcatcttagcgcctaattattatttgtatttt 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13083 tgccatgttctaaggtatgcagatttccgcatcttagcgcctaattattatttgtatttt 13024 Query: 290 gtttagaacgattgggcattttgtttgtggtttagataagggaaattatcttccatacaa 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13023 gtttagaacgattgggcattttgtttgtggtttagataagggaaattatcttccatacaa 12964 Query: 350 aaatgtcatttccgttagcgtatatgaaaaaaaacatggatcgcagataaaagttaagat 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12963 aaatgtcatttccgttagcgtatatgaaaaaaaacatggatcgcagataaaagttaagat 12904 Query: 410 aagccattccattctcttctatgccatttacagtgttatcctcaaagttagaattcggat 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12903 aagccattccattctcttctatgccatttacagtgttatcctcaaagttagaattcggat 12844 Query: 470 acaaacgacagttctcgtacttgttattggcaagcgaaacttcaatggctaggtgaagag 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12843 acaaacgacagttctcgtacttgttattggcaagcgaaacttcaatggctaggtgaagag 12784 Query: 530 aaagtatataaactgctcagttatggaattaataaagtagcagaggttcatgagatgtta 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12783 aaagtatataaactgctcagttatggaattaataaagtagcagaggttcatgagatgtta 12724 Query: 590 gatctcgtttaattccgaagtgtcaa-ttttactacggttat-aatatagttcctaat-a 646 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | Sbjct: 12723 gatctcgtttaattccgaagtgtcaatttttactacggttataaatatagttcctaataa 12664 Query: 647 aaccaagtgtaa-ttcagt-aaagtaag-aatcttacgc-cacaagttgtaccttgtgct 702 |||||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 12663 aaccaagtgtaagttcagtgaaagtaagaaatcttacgcgcacaagttgtaccttgtgct 12604 Query: 703 -ctt-ctttactatataca-catttattaatat-ttcaaatacaagttgttaaaagccan 758 ||| |||||||||||||| ||||||||||||| |||||||||||||||||||| || Sbjct: 12603 gcttgctttactatatacagcatttattaatatgttcaaatacaagttgttaaagcgcaa 12544 Query: 759 aattgc-ataagatggagtccactttaggttggtcagtccaagattggttgagtttccat 817 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12543 aattgcaataagatggagtccactttaggttggtcagtccaagattggttgagtttccat 12484 Query: 818 ttcaaatcaa--ccccaactaagtcattaagaattgcttgaaaacttgntgaagatccca 875 | |||||||| | |||||||||||||| ||||||||||||||||||| ||||| || | Sbjct: 12483 tccaaatcaacgcgccaactaagtcatt-agaattgcttgaaaacttgttgaagtcccaa 12425 Query: 876 aagccagcaccagaaggaacctgcttgggatttctttaat 915 ||||||||||||| |||| ||||||| ||||||||||||| Sbjct: 12424 aagccagcaccag-aggaccctgctt-ggatttctttaat 12387 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6761 Number of Sequences: 1807 Number of extensions: 6761 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)