BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC43ZA02RM1.SCF screened BAC_end
         (944 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1749                                                        1386   0.0  

>3x_Contig1749 
          Length = 22923

 Score = 1386 bits (699), Expect = 0.0
 Identities = 851/880 (96%), Gaps = 18/880 (2%)
 Strand = Plus / Minus

                                                                         
Query: 50    ggtttacaaagcgatttattcattccccttatgaaagtagctgcactgtttgaaatacag 109
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 13262 ggtttacaaagcgatttatt-attccccttatgaaagtagctgcactgtttgaaatacag 13204

                                                                         
Query: 110   cgaaccgaaacacgaatacagtgcagcaaattcccctatagcagtatggtgggctccatt 169
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13203 cgaaccgaaacacgaatacagtgcagcaaattcccctatagcagtatggtgggctccatt 13144

                                                                         
Query: 170   gccttatgaaccaagctatccttactggcctgacggatataccccaagtgtatcctgtag 229
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13143 gccttatgaaccaagctatccttactggcctgacggatataccccaagtgtatcctgtag 13084

                                                                         
Query: 230   tgccatgttctaaggtatgcagatttccgcatcttagcgcctaattattatttgtatttt 289
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13083 tgccatgttctaaggtatgcagatttccgcatcttagcgcctaattattatttgtatttt 13024

                                                                         
Query: 290   gtttagaacgattgggcattttgtttgtggtttagataagggaaattatcttccatacaa 349
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13023 gtttagaacgattgggcattttgtttgtggtttagataagggaaattatcttccatacaa 12964

                                                                         
Query: 350   aaatgtcatttccgttagcgtatatgaaaaaaaacatggatcgcagataaaagttaagat 409
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12963 aaatgtcatttccgttagcgtatatgaaaaaaaacatggatcgcagataaaagttaagat 12904

                                                                         
Query: 410   aagccattccattctcttctatgccatttacagtgttatcctcaaagttagaattcggat 469
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12903 aagccattccattctcttctatgccatttacagtgttatcctcaaagttagaattcggat 12844

                                                                         
Query: 470   acaaacgacagttctcgtacttgttattggcaagcgaaacttcaatggctaggtgaagag 529
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12843 acaaacgacagttctcgtacttgttattggcaagcgaaacttcaatggctaggtgaagag 12784

                                                                         
Query: 530   aaagtatataaactgctcagttatggaattaataaagtagcagaggttcatgagatgtta 589
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12783 aaagtatataaactgctcagttatggaattaataaagtagcagaggttcatgagatgtta 12724

                                                                         
Query: 590   gatctcgtttaattccgaagtgtcaa-ttttactacggttat-aatatagttcctaat-a 646
             |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
Sbjct: 12723 gatctcgtttaattccgaagtgtcaatttttactacggttataaatatagttcctaataa 12664

                                                                         
Query: 647   aaccaagtgtaa-ttcagt-aaagtaag-aatcttacgc-cacaagttgtaccttgtgct 702
             |||||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct: 12663 aaccaagtgtaagttcagtgaaagtaagaaatcttacgcgcacaagttgtaccttgtgct 12604

                                                                         
Query: 703   -ctt-ctttactatataca-catttattaatat-ttcaaatacaagttgttaaaagccan 758
              ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||   || 
Sbjct: 12603 gcttgctttactatatacagcatttattaatatgttcaaatacaagttgttaaagcgcaa 12544

                                                                         
Query: 759   aattgc-ataagatggagtccactttaggttggtcagtccaagattggttgagtttccat 817
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12543 aattgcaataagatggagtccactttaggttggtcagtccaagattggttgagtttccat 12484

                                                                         
Query: 818   ttcaaatcaa--ccccaactaagtcattaagaattgcttgaaaacttgntgaagatccca 875
             | ||||||||  | |||||||||||||| ||||||||||||||||||| |||||  || |
Sbjct: 12483 tccaaatcaacgcgccaactaagtcatt-agaattgcttgaaaacttgttgaagtcccaa 12425

                                                     
Query: 876   aagccagcaccagaaggaacctgcttgggatttctttaat 915
             ||||||||||||| |||| ||||||| |||||||||||||
Sbjct: 12424 aagccagcaccag-aggaccctgctt-ggatttctttaat 12387


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6761
Number of Sequences: 1807
Number of extensions: 6761
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 944
length of database: 10,358,551
effective HSP length: 16
effective length of query: 928
effective length of database: 10,329,639
effective search space: 9585904992
effective search space used: 9585904992
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)