BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZA04RM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig952 1140 0.0 >3x_Contig952 Length = 3817 Score = 1140 bits (575), Expect = 0.0 Identities = 591/595 (99%), Gaps = 1/595 (0%) Strand = Plus / Plus Query: 48 agaaccccaaagctgatcagttccagaggaaagcagtttacaggagtaagcctattaagc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 agaaccccaaagctgatcagttccagaggaaagcagtttacaggagtaagcctattaagc 1393 Query: 108 caaaatggaggataagtgacgaaattatcaaaagactaaattggaatccattcaaagagt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 caaaatggaggataagtgacgaaattatcaaaagactaaattggaatccattcaaagagt 1453 Query: 168 taaacttgccaaaaaactcggaactacttgaatcattaagagatgtacaagttagatgta 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1454 taaacttgccaaaaaactcggaactacttgaatcattaagagatgtacaagttagatgta 1513 Query: 228 cgtcctatgcgcttgtcttcaaaagaattccaagttccaaaattgatttgatggtatcca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1514 cgtcctatgcgcttgtcttcaaaagaattccaagttccaaaattgatttgatggtatcca 1573 Query: 288 aaattcccgttagcttcaggagtgtaaatgctatcagttatgatcagttcgatccaaaat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1574 aaattcccgttagcttcaggagtgtaaatgctatcagttatgatcagttcgatccaaaat 1633 Query: 348 ctaaagagaatgtccaagagtctagtcagtgtattgattctcttgcaaatgaggaaacta 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1634 ctaaagagaatgtccaagagtctagtcagtgtattgattctcttgcaaatgaggaaacta 1693 Query: 408 ctgacgtcgatgaagtgacaaacaaaaggataatgacaagtgggaaacgctctttcataa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1694 ctgacgtcgatgaagtgacaaacaaaaggataatgacaagtgggaaacgctctttcataa 1753 Query: 468 acgcagatttagtaagcataatagcagccaaacggtccaaattgaagagactctccatat 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1754 acgcagatttagtaagcataatagcagccaaacggtccaaattgaagagactctccatat 1813 Query: 528 ctaatggtgatgttaacccagttgctactctgaacgatacagttgagcaatctacaatgg 587 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1814 ctaatggtgatgttaacccagttgctactctgaacgagacagttgagcaatctacaatgt 1873 Query: 588 ccaatggtcactttccaattaagcgataaaagtttccataatgctgaaaagaaag 642 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1874 ccaat-gtcactttccaattaagcgataaaagtttccataatgctgaagagaaag 1927 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9559 Number of Sequences: 1807 Number of extensions: 9559 Number of successful extensions: 91 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)