BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZA09FM1.SCF screened BAC_end (972 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1159 1098 0.0 >3x_Contig1159 Length = 4873 Score = 1098 bits (554), Expect = 0.0 Identities = 627/646 (97%), Gaps = 4/646 (0%) Strand = Plus / Plus Query: 83 agcttggtgacctcttttggtgcgtgcttagaaaggtatcttctattggactcatcgaca 142 |||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 1473 agcttggtgaccagttttggtgcatgctttgaaaggtatcttctattggactcatcgaca 1532 Query: 143 gcaatgtttgacaaagctgtcgtacagtaatattgaacgtcagcgtccatgctggagagt 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1533 gcaatgtttgacaaagctgtcgtacagtaatattgaacgtcagcgtccatgctggagagt 1592 Query: 203 aaagagacaagaactgtgtactgcaccagcatcgaccaattcctttctgttttctccaga 262 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1593 aaagagacaagaactggg-actgcaccagcatcgaccaattcctttctgttttctccaga 1651 Query: 263 gtgagtcatatttaacaaagctccagtagcatttctttgaactctgatatttgaagatct 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1652 gtgagtcatatttaacaaagctccagtagcatttctttgaactctgatatttgaagatct 1711 Query: 323 agccaactttgttaatggtaccaaggcacccgattgggcaatttcaatcttattgtcatc 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1712 agccaactttgttaatggtaccaaggcacccgattgggcaatttcaatcttattgtcatc 1771 Query: 383 ttgagtggccaagttggtaatacacccgacagcattacactgcacttccacgttatcaga 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1772 ttgagtggccaagttggtaatacacccgacagcattacactgcacttccacgttatcaga 1831 Query: 443 tttcatttgctcaatcaagggttccaatccacccatttccacaatcaacaacttattttc 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1832 tttcatttgctcaatcaagggttccaatccacccatttccacaatcaacaacttattttc 1891 Query: 503 attgttaacagccaaattacccaacgcagcacacgatgcaatcctaatttgtggatctgg 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1892 attgttaacagccaaattacccaacgcagcacacgatgcaatcctaatttgtggatctgg 1951 Query: 563 gttggtcaatagcattaatatcggcttcaaaacgtctctgcttaccggactaacatactt 622 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1952 gttggtcaatagcattaatatcggctccaaaacgtctctgcttaccggactaacatactt 2011 Query: 623 cttaataatttctggaaacggcaatgcagcacttttttgttaatttaaatttatcagaat 682 || | |||| |||| ||||| ||||||||||||| ||||| |||| ||| |||||||||| Sbjct: 2012 ctcagtaatctctgcaaacgccaatgcagcacttctttgtaaattcaaa-ttatcagaat 2070 Query: 683 aaaccaacgttgtttaaagcccgtaaccgttttccccgaatagaaa 728 |||||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 2071 aaaccaacgttg-ttaaagcccgtaa-cggtttccccgaatagaaa 2114 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8943 Number of Sequences: 1807 Number of extensions: 8943 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 972 length of database: 10,358,551 effective HSP length: 16 effective length of query: 956 effective length of database: 10,329,639 effective search space: 9875134884 effective search space used: 9875134884 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)