BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZA10FM1.SCF screened BAC_end (1053 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1034 410 e-114 >3x_Contig1034 Length = 3729 Score = 410 bits (207), Expect = e-114 Identities = 234/239 (97%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 87 cggttcttcacgaaagttggaaagataccctactacttcgctcgaatcattagagacaga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2844 cggttcttcacgaaagttggaaagataccctactacttcgctcgaatcattagagacaga 2903 Query: 147 actaaagcgcttgaatgagaatttagtggccctaatggatgatattcatcagaacattac 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2904 actaaagcgcttgaatgagaatttagtggccctaatggatgatattcatcagaacattac 2963 Query: 207 taacgtctccaaagctgttattcaagctattgaatttttcaagaagtttttaccagagac 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2964 taacgtctccaaagctgttattcaagctattgaatttttcaagaagtttttaccagagac 3023 Query: 267 taatagggatcacatatactgtttaaatgggctaatagtgccgcttctacgaagcattg 325 ||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| Sbjct: 3024 taata-ggatcacatatactgttacaat-ggctaatagtgccgc-tctacgaagcattg 3079 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,627 Number of Sequences: 1807 Number of extensions: 16627 Number of successful extensions: 122 Number of sequences better than 1.0e-20: 1 length of query: 1053 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1037 effective length of database: 10,329,639 effective search space: 10711835643 effective search space used: 10711835643 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)