BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZA11RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1238 1447 0.0 >3x_Contig1238 Length = 5289 Score = 1447 bits (730), Expect = 0.0 Identities = 819/842 (97%), Gaps = 6/842 (0%) Strand = Plus / Minus Query: 52 catctcttcatttaaccgtcattcatcatgcatcttctttctatatagtttctcaacgtc 111 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2994 catctcttcatttaaccgccattcatcatgcatcttctttctatatagtttctcaacgtc 2935 Query: 112 cggattcatccttaatgctttacggtaatatttgatcgcgtcggtcatagcaccggcagt 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2934 cggattcatccttaatgctttacggtaatatttgatcgcgtcggtcatagcaccggcagt 2875 Query: 172 ttccttcgaatagcccaactcccatagtgctatagcttcaatcggttcctccattacgcg 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2874 ttccttcgaatagcccaactcccatagtgctatagcttcaatcggttcctccattacgcg 2815 Query: 232 ttgttatttttcgtgcgttaggccccttggtaatgagtatgcttcctctctcttttacct 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2814 ttgttatttttcgtgcgttaggccccttggtaatgagtatgcttcctctctcttttacct 2755 Query: 292 tatatagccgactagctttttatgctgtttacgttttgttcagctttacgcaacaggaac 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2754 tatatagccgactagctttttatgctgtttacgttttgttcagctttacgcaacaggaac 2695 Query: 352 gaatataaagttactaccgagagatggacaagtacgcacaatgttgaaaaatatgaagtg 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2694 gaatataaagttactaccgagagatggacaagtacgcacaatgttgaaaaatatgaagtg 2635 Query: 412 gattccttgtcagtagctgccatcctcagcaaatcggatttcttgattcttatctgacta 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2634 gattccttgtcagtagctgccatcctcagcaaatcggatttcttgattcttatctgacta 2575 Query: 472 aaaagtaatattaagtacatggcatatttaatatatgaagagctatataacttcaaagtt 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2574 aaaagtaatattaagtacatggcatatttaatatatgaagagctatataacttcaaagtt 2515 Query: 532 cattaatatgtgaatatcacaagaaacacagtcgataaatcataaatagccagtccttca 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2514 cattaatatgtgaatatcacaagaaacacagtcgataaatcataaatagccagtccttca 2455 Query: 592 agatctggtgcatcaatgaaaagcangaactaaaacanagtgcanagtgtgtagtgctgt 651 ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| Sbjct: 2454 agatctggtgcatcaatgaaaagcaggaactaaaacaaagtgcaaagtgtgtagtgctgt 2395 Query: 652 atagatgctgcttatttcattgttatgtcaccacccgattaatttatcgatntcattcaa 711 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 2394 atagatgctgcttatttcattgttatgtcacca-ccgattaatttatcgatttcattcaa 2336 Query: 712 taaagtaaaatcaaaattatatttccaaggcaaattcattaccattagataaacttccca 771 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 2335 taaagtaaaatcaaaattata-ttcaaaggcaaattcattaccattagataaacttccca 2277 Query: 772 agagtgcagggttttcaagtccaggataagcatttatattgctacctttggaca-tttca 830 ||||||||| |||||||||||||| || ||||||||||||||||| ||| |||| ||||| Sbjct: 2276 agagtgcagtgttttcaagtccagtattagcatttatattgctactttttgacattttca 2217 Query: 831 attcattaatcg-aaaaattcttggctagctcgtaattcatggaccggaaatcctagaaa 889 |||||| |||| |||| ||||||||||||||||| |||| || |||| |||||||||| Sbjct: 2216 tttcatt-atcgtaaaatttcttggctagctcgtagttcaatga-cggagatcctagaaa 2159 Query: 890 tt 891 || Sbjct: 2158 tt 2157 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6785 Number of Sequences: 1807 Number of extensions: 6785 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)