BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZA12RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1445 1511 0.0 >3x_Contig1445 Length = 8432 Score = 1511 bits (762), Expect = 0.0 Identities = 831/849 (97%), Gaps = 4/849 (0%) Strand = Plus / Plus Query: 53 tcttctagttctagcagccatgaaaccaaagactggagagtagatacccgcgacgaaact 112 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 tcttctagttctagcaaccatgaaaccaaagactggagagtagatacccgcgacgaaact 559 Query: 113 gtacaagttcataattcttgttgcagaaagatcagtttgattcataccgaccaaaagaat 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 gtacaagttcataattcttgttgcagaaagatcagtttgattcataccgaccaaaagaat 619 Query: 173 tgtgtaaaggtaaccagctgccattacataaacgaaacagaccaatatcatcatccacat 232 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 620 tgtgtaaaggtaaccagctgccattacataaacgaaacagaccaagaacatcatccacat 679 Query: 233 tggagcccaaataccacggtccttcaacaacttgaatggagcaaatggagccttagccca 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 tggagcccaaataccacggtccttcaacaacttgaatggagcaaatggagccttagccca 739 Query: 293 ttgactttcccagtaaatggtgacaggaacaaggaaaaccccaagaactaacggtccgat 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 ttgactttcccagtaaatggtgacaggaacaaggaaaaccccaagaactaacggtccgat 799 Query: 353 gatcttaccagttttccattcgttctcaataccaccagcaattgtcaatggaacaaggat 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 gatcttaccagttttccattcgttctcaataccaccagcaattgtcaatggaacaaggat 859 Query: 413 gcaacccatagatgctgttaacaagagtaaaccaatgatatcaagtttccaaaacaattg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 gcaacccatagatgctgttaacaagagtaaaccaatgatatcaagtttccaaaacaattg 919 Query: 473 gaccaaagtttgaatgagaccatgggtttgatagaaagtcttttcttgtttcaattccat 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 920 gaccaaagtttgaatgagaccatgggtttgatagaaagtcttttcttgtttcaattccat 979 Query: 533 ccactctggagtcttgcttgccttctacctcatatgaagtacacaaacgattaatgggat 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 980 ccactctggagtcttgcttgccttctacctcatatgaagtacacaaacgattaatgggat 1039 Query: 593 acaacttaaggggaagatgaatgcccacattgcaatgttccaagaccaattntccaatgg 652 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1040 acaacttaaggggaagatgaatgcccacattgcaatgttccaagaccaattttccaatgg 1099 Query: 653 gttggctacctcgacgatgttaccggaaacccacatgttaatgatagctggccaagcagg 712 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1100 gttggctacctcgacgatgttaccggaaacccacatgttaatgatagctggccaagcagg 1159 Query: 713 aacaaagttgtacaacactctccatctcaacgaaaaagtatcggacaggaac-aagttac 771 |||||||||||||||||||||||||||||||||| | ||||||||| |||| |||| || Sbjct: 1160 aacaaagttgtacaacactctccatctcaacgaagagttatcggacaagaacaaagtaac 1219 Query: 772 tttgaacattacaccaac-agtcccacgttatagaaaacggacccggcgcaatatttttg 830 || | |||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 1220 ttgaagcattacaccaacaagtcccacgttatagaaaacggacccggcgcaatatttctg 1279 Query: 831 aatatcatacgcttgcgattg-atcacggtaccaacaacgt-aaacacaatggcgacgat 888 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| Sbjct: 1280 aatatcatacgcttgcgattgaatcacggtaccaacaacgtaaaacacaatggcaacgat 1339 Query: 889 cattaaact 897 ||||||||| Sbjct: 1340 cattaaact 1348 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6573 Number of Sequences: 1807 Number of extensions: 6573 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)