BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZB02RM1.SCF screened BAC_end (882 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1056 1487 0.0 >3x_Contig1056 Length = 3113 Score = 1487 bits (750), Expect = 0.0 Identities = 822/839 (97%), Gaps = 7/839 (0%) Strand = Plus / Minus Query: 51 gatgaaatagaagaggcaatattaactttgtcaacaaaccactctctcgataaaatggct 110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2824 gatgaaatagaagaggcaatattaactttgtcaacaaaccactctctcgataaaatggct 2765 Query: 111 caagatacaatcgtgagcgcactttcgaacatattaagcctcctaaaaatttcagaggag 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2764 caagatacaatcgtgagcgcactttcgaacatattaagcctcctaaaaatttcagaggag 2705 Query: 171 ttcaactcaaccactgtaccatcaatgtggcgttccaccgtgcagatgagcattgatgtg 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2704 ttcaactcaaccactgtaccatcaatgtggcgttccaccgtgcagatgagcattgatgtg 2645 Query: 231 ctggatcgctttttatatattggcactataccaggagttttggatcgcctattccaactg 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2644 ctggatcgctttttatatattggcactataccaggagttttggatcgcctattccaactg 2585 Query: 291 gggttttctattcccgagcaatatgccaatgatgatgaccttgcagttattggaggtaaa 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2584 gggttttctattcccgagcaatatgccaatgatgatgaccttgcagttattggaggtaaa 2525 Query: 351 acaataaaaaatgaggagtttgttacttacgactctgatgaggatgatgacatagatgag 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2524 acaataaaaaatgaggagtttgttacttacgactctgatgaggatgatgacatagatgag 2465 Query: 411 gttatagagaattataaaacgagaatagaccattcactacgtatgacgaatatctataac 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2464 gttatagagaattataaaacgagaatagaccattcactacgtatgacgaatatctataac 2405 Query: 471 actgctgatgcgtcgtcattaagagatttattagaaggcttgaaagagatcgaaacagaa 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2404 actgctgatgcgtcgtcattaagagatttattagaaggcttgaaagagatcgaaacagaa 2345 Query: 531 gttgaaggggaagatttgacgccaaatgaactaaccgtaaacctattaaagcaccaaaga 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2344 gttgaaggggaagatttgacgccaaatgaactaaccgtaaacctattaaagcaccaaaga 2285 Query: 591 caaggtttacgatggctagtgtcaatggaaaaatccagcaaaaggggtggtttattggct 650 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2284 caaggtttacgatggctagtgtcaatggaaaaatccagcaaaaggggtggtttattggct 2225 Query: 651 gatgatatgggtcttggtaaaactgttcagagtctcgccttattaatggcaaacaagcca 710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2224 gatgatatgggtcttggtaaaactgttcagagtctcgccttattaatggcaaacaagcca 2165 Query: 711 gaaccgaagtcagcgattaaaacgacattggttgttgcccctgtggctgttttgaga-tg 769 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2164 gaaccgaagtcagcgattaaaacgacattggttgttgcccctgtggctgttttgagagtg 2105 Query: 770 tggaaagac--aatcgctgtcaaaat-aagaaagatgtt-atgttaaaggtgtgatattc 825 ||||||||| | ||||||||||||| ||||| |||||| ||||||| | ||||||||| Sbjct: 2104 tggaaagacgaagtcgctgtcaaaataaagaaggatgttaatgttaaggtggtgatattc 2045 Query: 826 gnnagtggtgaaaat-atagcagcaaattcagaatttggaaaaactt-gccgaatacga 882 | ||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||| Sbjct: 2044 ggaggtggtgaaaataatagcagcaaattcagaagttggaaagacttggccgaatacga 1986 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6086 Number of Sequences: 1807 Number of extensions: 6086 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 882 length of database: 10,358,551 effective HSP length: 16 effective length of query: 866 effective length of database: 10,329,639 effective search space: 8945467374 effective search space used: 8945467374 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)