BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZB03FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig287 771 0.0 >3x_Contig287 Length = 1432 Score = 771 bits (389), Expect = 0.0 Identities = 429/443 (96%) Strand = Plus / Plus Query: 88 ccaatagattcaccgtatcaacggctgttacaattgaataaacgaatgaaaaacaacccg 147 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 987 ccaatagattcaccgtatcaacggctgttacaattgaataaacgaatgacaaacaacccg 1046 Query: 148 cacttagttcaacctgcaaacaattaaaggcgagtaccttatatcgaccttaaataacaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1047 cacttagttcaacctgcaaacaattaaaggcgagtaccttatatcgaccttaaataacaa 1106 Query: 208 tccaaggatcctaaaaaccgattgtgctaaaagcagtcttgcttcatttgcaaatattga 267 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1107 tccaaggctcctaaaaaccgattgtgctaaaagcagtcttgcttcatttgcaaatattga 1166 Query: 268 agttgttcattttgcaattggatgtttctttcaattattttcatttcgtcaaacatcgcc 327 |||||||||||||||||||||||| ||| ||||| || | ||||||||||||||||| Sbjct: 1167 cgttgttcattttgcaattggatgtctctctcaatatttcccctttcgtcaaacatcgcc 1226 Query: 328 caaaaacattcaaaaactatccgggtaatagtatagcctctgatgagatcgctattacca 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1227 caaaaacattcaaaaactatccgggtaatagtatagcctctgatgagatcgctattacca 1286 Query: 388 tttaaacagttntaggcaaaaagctagagatgaatacagctgtgaagtatgtttttggat 447 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 tttaaacagttttaggcaaaaacctagagatgaatacagctgtgaagtatgtttttcgat 1346 Query: 448 gaggacgtctcatcagagtaatacttgggagtttgtcagctgttgtcaagagaactatag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1347 gaggacgtctcatcagagtaatacttgggagtttgtcagctgttgtcaagagaactatag 1406 Query: 508 agcancatgatcacgaaatattt 530 |||| |||||||||||||||||| Sbjct: 1407 agcaacatgatcacgaaatattt 1429 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8325 Number of Sequences: 1807 Number of extensions: 8325 Number of successful extensions: 72 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)