BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZC06FM1.SCF screened BAC_end (964 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1767 1009 0.0 >3x_Contig1767 Length = 23302 Score = 1009 bits (509), Expect = 0.0 Identities = 598/621 (96%), Gaps = 5/621 (0%) Strand = Plus / Minus Query: 92 cttatatataaagctttttccctcgctggaagattttcaagacttcgtcttttagaagcg 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18499 cttatatataaagctttttccctcgctggaagattttcaagacttcgtcttttagaagcg 18440 Query: 152 aaaaggccgaaacgtagtattattggttcgtatacagtgatactggtagtgaaacttact 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18439 aaaaggccgaaacgtagtattattggttcgtatacagtgatactggtagtgaaacttact 18380 Query: 212 tttatttatttagttgcacgtgatctaaaatggttagataatatatgctttacctacttc 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18379 tttatttatttagttgcacgtgatctaaaatggttagataatatatgctttacctacttc 18320 Query: 272 tttctgtggtatattttgttcaagaacaag-ttagaacttcggccttgaacccacgggat 330 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 18319 tttctgtggtatattttgttcaagaacaaggttagaacttcggccttgaacccacgggat 18260 Query: 331 tcgtcgatgttagcgattttctctcttaagttggaagcggtttcttcttcgtacttgtgg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18259 tcgtcgatgttagcgattttctctcttaagttggaagcggtttcttcttcgtacttgtgg 18200 Query: 391 tagatgtcttggatgttcatttcgttgaatacagctctacatttttgttccttttcagaa 450 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 18199 tagatgtcttggatgttcaattcgttgaatacagctctacatttttgttccttttcagaa 18140 Query: 451 tcctttctaccgtagttttcgtccaagatatctctttgttcttttgaagcattcttcaat 510 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 18139 tcctttctaccgtagttttcgtccaagatatctctttgttcttttgtagcattcttcaat 18080 Query: 511 gcaacgttgatgacccaagaacatttgttgtcttggatattcgtaccaatcttaccgata 570 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 18079 gcaacgttgatgacccaagaacatttgttgtcttggatatcggtaccaatcttaccgata 18020 Query: 571 tcttttggtttaccgaaac-attcaggaaaatctcttggattt-gaaatatcct-ccaat 627 |||| |||||||||||||| || || |||| |||||||||| ||||||| || ||||| Sbjct: 18019 tcttctggtttaccgaaacaatccaagaaatcgtcttggatttggaaatattctcccaat 17960 Query: 628 gggatcattacgtcgctggcctgttttcagttcttttgaatcggtaataccggcagcaaa 687 ||||||| ||||||||||||||| ||||| || ||||| |||||||||||||||||||| Sbjct: 17959 gggatcaatacgtcgctggcctg-tttcaagtcctttgagtcggtaataccggcagcaaa 17901 Query: 688 cttggccagtggcactgctaa 708 | ||||||||| ||||||||| Sbjct: 17900 catggccagtgccactgctaa 17880 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9468 Number of Sequences: 1807 Number of extensions: 9468 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 964 length of database: 10,358,551 effective HSP length: 16 effective length of query: 948 effective length of database: 10,329,639 effective search space: 9792497772 effective search space used: 9792497772 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)