BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZC06RM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 1459 0.0 >3x_Contig1801 Length = 57606 Score = 1459 bits (736), Expect = 0.0 Identities = 804/821 (97%), Gaps = 5/821 (0%) Strand = Plus / Plus Query: 47 agacatctaacgatttaagatgtttgataagccaaagttctttttgcttcaagttcttag 106 |||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 21208 agacatctaaagatttaggaagtttgataagccaaagttctttttgcttcaagttcttag 21267 Query: 107 gcttcacgaatgatttcaaatgtgtacatttcttatagttttcaggtggaacgaaaacgt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21268 gcttcacgaatgatttcaaatgtgtacatttcttatagttttcaggtggaacgaaaacgt 21327 Query: 167 ccgttacagtttctgatgatccatcattatcgctgtcgctatcactgatgtattcctttg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21328 ccgttacagtttctgatgatccatcattatcgctgtcgctatcactgatgtattcctttg 21387 Query: 227 aaagagttttgtcgaccttggccattgtttgagatatttcttataacgttttgcgagtgg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21388 aaagagttttgtcgaccttggccattgtttgagatatttcttataacgttttgcgagtgg 21447 Query: 287 aataatattacagggaagggtgtaacaaaaactcacctgaactagttaaactgtaattgg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21448 aataatattacagggaagggtgtaacaaaaactcacctgaactagttaaactgtaattgg 21507 Query: 347 aaccctaggaccacacagaacctcacttatctgcctctgtgtgtctatttgaatctgcaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21508 aaccctaggaccacacagaacctcacttatctgcctctgtgtgtctatttgaatctgcaa 21567 Query: 407 tgagatgagatgagcttaaaccgaattttttcatcttgggaaagacttttctttcttttt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21568 tgagatgagatgagcttaaaccgaattttttcatcttgggaaagacttttctttcttttt 21627 Query: 467 agacgttacccgggaaaatgcacgtggttaacacgtggaacaaactatcgtattcatgaa 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21628 agacgttacccgggaaaatgcacgtggttaacacgtggaacaaactatcgtattcatgaa 21687 Query: 527 atctgttccagttcatcacanaccatcgagaaatggtatgtccgacttgaacagccttcg 586 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 21688 atctgttccagttcatcacaaaccatcgagaaatggtatgtccgacttgaacagccttcg 21747 Query: 587 agcaacatttattggatcactaatactatgattcccgttgaatggtatgacatcgatgcc 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21748 agcaacatttattggatcactaatactatgattcccgttgaatggtatgacatcgatgcc 21807 Query: 647 ctaagtacttggtttactgtattatcatgtcgaacgacgcaattattccaaaaattttnt 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 21808 ctaagtacttggtttactgtattatcatgtcgaacgacgcaattattccaaaaatttttt 21867 Query: 707 ccatgcttcttcgacacgaagaatataaaagggctggt-atgagaaaacaactanacatg 765 |||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||||| Sbjct: 21868 ccatgcttcttcgacacgaagaatataaaaaggctggtaatgagaaacaaactagacatg 21927 Query: 766 ttaaactcatcaaaccatttatccaggtta-gtattgaaaagttcttgtagtttggtctc 824 |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 21928 ttaaactcatcaaaccatttatccaggttaggtattgaaaagttc-tgtaggttgttctc 21986 Query: 825 tagcctcacttgctgtgggc-agtgagcttt-tagtatcct 863 |||||||||||||||| ||| |||||||||| ||||||||| Sbjct: 21987 tagcctcacttgctgttggcaagtgagctttatagtatcct 22027 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7296 Number of Sequences: 1807 Number of extensions: 7296 Number of successful extensions: 273 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)