BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC43ZC06RM1.SCF screened BAC_end
         (944 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1801                                                        1459   0.0  

>3x_Contig1801 
          Length = 57606

 Score = 1459 bits (736), Expect = 0.0
 Identities = 804/821 (97%), Gaps = 5/821 (0%)
 Strand = Plus / Plus

                                                                         
Query: 47    agacatctaacgatttaagatgtttgataagccaaagttctttttgcttcaagttcttag 106
             |||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 21208 agacatctaaagatttaggaagtttgataagccaaagttctttttgcttcaagttcttag 21267

                                                                         
Query: 107   gcttcacgaatgatttcaaatgtgtacatttcttatagttttcaggtggaacgaaaacgt 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21268 gcttcacgaatgatttcaaatgtgtacatttcttatagttttcaggtggaacgaaaacgt 21327

                                                                         
Query: 167   ccgttacagtttctgatgatccatcattatcgctgtcgctatcactgatgtattcctttg 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21328 ccgttacagtttctgatgatccatcattatcgctgtcgctatcactgatgtattcctttg 21387

                                                                         
Query: 227   aaagagttttgtcgaccttggccattgtttgagatatttcttataacgttttgcgagtgg 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21388 aaagagttttgtcgaccttggccattgtttgagatatttcttataacgttttgcgagtgg 21447

                                                                         
Query: 287   aataatattacagggaagggtgtaacaaaaactcacctgaactagttaaactgtaattgg 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21448 aataatattacagggaagggtgtaacaaaaactcacctgaactagttaaactgtaattgg 21507

                                                                         
Query: 347   aaccctaggaccacacagaacctcacttatctgcctctgtgtgtctatttgaatctgcaa 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21508 aaccctaggaccacacagaacctcacttatctgcctctgtgtgtctatttgaatctgcaa 21567

                                                                         
Query: 407   tgagatgagatgagcttaaaccgaattttttcatcttgggaaagacttttctttcttttt 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21568 tgagatgagatgagcttaaaccgaattttttcatcttgggaaagacttttctttcttttt 21627

                                                                         
Query: 467   agacgttacccgggaaaatgcacgtggttaacacgtggaacaaactatcgtattcatgaa 526
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21628 agacgttacccgggaaaatgcacgtggttaacacgtggaacaaactatcgtattcatgaa 21687

                                                                         
Query: 527   atctgttccagttcatcacanaccatcgagaaatggtatgtccgacttgaacagccttcg 586
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 21688 atctgttccagttcatcacaaaccatcgagaaatggtatgtccgacttgaacagccttcg 21747

                                                                         
Query: 587   agcaacatttattggatcactaatactatgattcccgttgaatggtatgacatcgatgcc 646
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21748 agcaacatttattggatcactaatactatgattcccgttgaatggtatgacatcgatgcc 21807

                                                                         
Query: 647   ctaagtacttggtttactgtattatcatgtcgaacgacgcaattattccaaaaattttnt 706
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 21808 ctaagtacttggtttactgtattatcatgtcgaacgacgcaattattccaaaaatttttt 21867

                                                                         
Query: 707   ccatgcttcttcgacacgaagaatataaaagggctggt-atgagaaaacaactanacatg 765
             |||||||||||||||||||||||||||||| ||||||| ||||||||  ||||| |||||
Sbjct: 21868 ccatgcttcttcgacacgaagaatataaaaaggctggtaatgagaaacaaactagacatg 21927

                                                                         
Query: 766   ttaaactcatcaaaccatttatccaggtta-gtattgaaaagttcttgtagtttggtctc 824
             |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||
Sbjct: 21928 ttaaactcatcaaaccatttatccaggttaggtattgaaaagttc-tgtaggttgttctc 21986

                                                      
Query: 825   tagcctcacttgctgtgggc-agtgagcttt-tagtatcct 863
             |||||||||||||||| ||| |||||||||| |||||||||
Sbjct: 21987 tagcctcacttgctgttggcaagtgagctttatagtatcct 22027


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7296
Number of Sequences: 1807
Number of extensions: 7296
Number of successful extensions: 273
Number of sequences better than 1.0e-20: 1
length of query: 944
length of database: 10,358,551
effective HSP length: 16
effective length of query: 928
effective length of database: 10,329,639
effective search space: 9585904992
effective search space used: 9585904992
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)