BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZC11RM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1794 1411 0.0 >3x_Contig1794 Length = 36744 Score = 1411 bits (712), Expect = 0.0 Identities = 810/834 (97%), Gaps = 7/834 (0%) Strand = Plus / Minus Query: 59 aagcgctgacagtacgaggttttaatttaattgt-aatttggatggatcaccaagtaaca 117 ||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 4215 aagcgctcacagtaggaggttttaatttaattttcaatttggatggatcaccaagtaaca 4156 Query: 118 cttcttcgtatatcctgtaaagagatgaaggatattgattccaaacacgttttaacaact 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4155 cttcttcgtatatcctgtaaagagatgaaggatattgattccaaacacgttttaacaact 4096 Query: 178 gcttagcttcttcaatgcaggacaatttccaataagaatatacggcagtcattcccagtc 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4095 gcttagcttcttcaatgcaggacaatttccaataagaatatacggcagtcattcccagtc 4036 Query: 238 ctaaagtaaaccactgtttgtataggttgaataaaggattctttatcatttgaataatgt 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4035 ctaaagtaaaccactgtttgtataggttgaataaaggattctttatcatttgaataatgt 3976 Query: 298 actgatattcatcattggcagccaaataatgatccatgaaatatcttgctcctaaaggat 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3975 actgatattcatcattggcagccaaataatgatccatgaaatatcttgctcctaaaggat 3916 Query: 358 cttccaaaggtgataaagaaagaagagttttacaccactgagcggctgttgaaacggcac 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3915 cttccaaaggtgataaagaaagaagagttttacaccactgagcggctgttgaaacggcac 3856 Query: 418 ctctttgagatacgatttgaatatatctcatgatagccaaataaaactgtctgttgtaaa 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3855 ctctttgagatacgatttgaatatatctcatgatagccaaataaaactgtctgttgtaaa 3796 Query: 478 aatatatgtagggaagttggaaatccttagcagtgaactcaatcccatttttcaaacaac 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3795 aatatatgtagggaagttggaaatccttagcagtgaactcaatcccatttttcaaacaac 3736 Query: 538 ggtcgaagacaaatagtgcacgttcaaccaaaccattactgttagatttgtcaccttgcc 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3735 ggtcgaagacaaatagtgcacgttcaaccaaaccattactgttagatttgtcaccttgcc 3676 Query: 598 ttacgcatatcaaggcaacttgtaagagccctggtacatgataagggaattgcgaagata 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3675 ttacgcatatcaaggcaacttgtaagagccctggtacatgataagggaattgcgaagata 3616 Query: 658 ttattgatattagtgcttcatgatcagggtgtaagactgtactcangtagaattcggtta 717 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3615 ttattgatattagtgcttcatgatcagggtgtaagactgtactcaggtagaattcggtta 3556 Query: 718 aagcctttttgctattggtatcgttt-aagcatcgaatttataataaagtaaatgcttta 776 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| Sbjct: 3555 aagcctttttgctattggtatcgtttaaagcatcgaatttataataagtaaaatgc-tta 3497 Query: 777 gacatttggcggtcaacatcgtctttgatgacagcattccaattcaaagnacgctgtcat 836 ||| || ||| ||||||||||||||||||||||||| ||||| ||||| |||||| ||| Sbjct: 3496 gaccatttgcgttcaacatcgtctttgatgacagcatcccaatccaaaggacgctgccat 3437 Query: 837 cttcgaccatttttgttagatcgtccgttggacaacttttttcaggatgaattc 890 | ||||||| |||||||||||||| |||| |||||| ||||||| ||||||||| Sbjct: 3436 c-tcgacca-ttttgttagatcgt-cgttagacaac-tttttcaagatgaattc 3387 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7214 Number of Sequences: 1807 Number of extensions: 7214 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)