BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZD02FM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1718 948 0.0 >3x_Contig1718 Length = 19496 Score = 948 bits (478), Expect = 0.0 Identities = 629/670 (93%), Gaps = 8/670 (1%) Strand = Plus / Minus Query: 87 cgctaggctactaacccaaagcgagaatcataccactagaccacacgccctcgcaatttt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4955 cgctaggctactaacccaaagcgagaatcataccactagaccacacgccctcgcaatttt 4896 Query: 147 ggcagaaaacttttctaggtgtccacagagtctgtgaatgtcatgtgatcggcgaatgaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4895 ggcagaaaacttttctaggtgtccacagagtctgtgaatgtcatgtgatcggcgaatgaa 4836 Query: 207 gtcttgaagacctcagttgctaactgatttgcatgttcagctccttcctctagattgagg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4835 gtcttgaagacctcagttgctaactgatttgcatgttcagctccttcctctagattgagg 4776 Query: 267 cttcatacctcacagtggtgtacgtatttttagaggtcttttatcaaacattgctgaaag 326 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4775 cttcatacctcacagtggtgtacgtattttagaaggtcttttatcaaacattgctgaaag 4716 Query: 327 tttatactatcccccaattaattgcccaatggcaattaattcatatattgaagaagtatt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4715 tttatactatcccccaattaattgcccaatggcaattaattcatatattgaagaagtatt 4656 Query: 387 tataacattctgttgttaatgataaatataaagaggctaatgangataaattagctcang 446 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 4655 tataacattctgttgttaatgataaatataaagaggctaatgagataaaattagctcagg 4596 Query: 447 gagtttcactgtcgtagtaaaaagatttccgctggttgcaattaatanaaggtatttttg 506 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4595 gagtttcactgtcgtagtaaaaagatttccgctggttgcaattaataaaaggtatttttg 4536 Query: 507 cgttgattcaaa-ggtgaaattcatttataaattatcc-aagatgcacattgntagcacg 564 |||||||||||| |||||||| |||| ||||||||||| ||||||||||||| ||||||| Sbjct: 4535 cgttgattcaaagggtgaaatccattaataaattatccaaagatgcacattgttagcacg 4476 Query: 565 tggtttccgctttcgtacataatttaaaggaaattcaggcacttcaacgaa-taaatagc 623 ||||||| |||| ||||||||| ||||||| |||||| ||| |||||||| |||||||| Sbjct: 4475 tggtttcggcttccgtacataaattaaagggaattcaagcaactcaacgaattaaatagc 4416 Query: 624 ttgcgtgggcgtattgcaaacgcgtcttgacttctaataagaggattggtggtttcgacc 683 | |||| |||||| || |||||||| ||||||||||| ||| |||| |||| ||||||| Sbjct: 4415 tcgcgt-ggcgtaatggcaacgcgtc-tgacttctaatcagaagatt-gtgggttcgacc 4359 Query: 684 cccacccgtgagtgctttttttcaaaattcgcgaatattttattggttagaattccggct 743 |||| ||||||||||||| ||||||||| |||| ||| |||| |||||||||||| ||| Sbjct: 4358 ccca-ccgtgagtgctttatttcaaaatccgcg-atagtttaatggttagaattcgcgct 4301 Query: 744 tgtcccgtgc 753 |||| ||||| Sbjct: 4300 tgtcgcgtgc 4291 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7253 Number of Sequences: 1807 Number of extensions: 7253 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)