BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZD03RM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1642 856 0.0 >3x_Contig1642 Length = 16641 Score = 856 bits (432), Expect = 0.0 Identities = 485/496 (97%), Gaps = 5/496 (1%) Strand = Plus / Minus Query: 68 cgaactataactattgaaatacataaaactgtatggaacattagaaagcacaaagcaaag 127 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15547 cgaactataact-ttgaaatacataaaactgtatggaacattagaaagcacaaagcaaag 15489 Query: 128 cgtgttgctattcaaatgcctgaagggttgct-catatactctttggtgataagtgatat 186 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 15488 cgtgttgctattcaaatgcctgaagggttgctgcatatactctttggtgataagtgatat 15429 Query: 187 tttggagcagttctgtcagtgtgagattgtggttatgggcgatgtttcttatggtgcatg 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15428 tttggagcagttctgtcagtgtgagattgtggttatgggcgatgtttcttatggtgcatg 15369 Query: 247 ctgtattgatgactatacagcaagatcgttggattgtgatttcattgtccattatgcaca 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15368 ctgtattgatgactatacagcaagatcgttggattgtgatttcattgtccattatgcaca 15309 Query: 307 ttcctgcttagttccgatcgatattactactatcaaggtactttacatctttgtcactat 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15308 ttcctgcttagttccgatcgatattactactatcaaggtactttacatctttgtcactat 15249 Query: 367 caatattgatgagacacatctaataaagacgttacagaagaacttcccaagaggttcacg 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15248 caatattgatgagacacatctaataaagacgttacagaagaacttcccaagaggttcacg 15189 Query: 427 gattgctgcattcggaacaattcagtttaatccaactatccatagtatgaaggacaaatt 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15188 gattgctgcattcggaacaattcagtttaatccaactatccatagtatgaaggacaaatt 15129 Query: 487 gttgcagtcggagg-acacatgttatttatcat-cccccttagatcaaa-cacttttcaa 543 |||||||||||||| ||||||||||| |||||| |||||| |||||||| |||||| || Sbjct: 15128 gttgcagtcggaggaacacatgttatatatcatcccccctcagatcaaaccactttcgaa 15069 Query: 544 aggtgaagtttttggg 559 ||||||||| ||||| Sbjct: 15068 gggtgaagttcttggg 15053 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7800 Number of Sequences: 1807 Number of extensions: 7800 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)