BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZD06FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig885 1354 0.0 >3x_Contig885 Length = 2781 Score = 1354 bits (683), Expect = 0.0 Identities = 782/807 (96%), Gaps = 6/807 (0%) Strand = Plus / Minus Query: 84 ttctacaatctatttacgaaggatgctttaaaactggcccaaatgcattctaacggtaag 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2366 ttctacaatctatttacgaaggatgctttaaaactggcccaaatgcattctaacggtaag 2307 Query: 144 atcatttcagtcatggaaggtggttattcggacggtgccattgcatctggtgtcttttca 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2306 atcatttcagtcatggaaggtggttattcggacggtgccattgcatctggtgtcttttca 2247 Query: 204 cacttgattgggttccaaaatcagaattggatcagcgagtggggttctgaacaagttgtt 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2246 cacttgattgggttccaaaatcagaattggatcagcgagtggggttctgaacaagttgtt 2187 Query: 264 aaggagattatcagaggttgtaaaccaagatggaagccatacaagacaaagaaagctcgg 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2186 aaggagattatcagaggttgtaaaccaagatggaagccatacaagacaaagaaagctcgg 2127 Query: 324 gacgtaataaggatctgggctgaagaggtcatcatgcttggccgcagtatgattccagaa 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2126 gacgtaataaggatctgggctgaagaggtcatcatgcttggccgcagtatgattccagaa 2067 Query: 384 ttcgagaaagtgttattcgatacagaggatactgtcactcacccagaagtcagactgacc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2066 ttcgagaaagtgttattcgatacagaggatactgtcactcacccagaagtcagactgacc 2007 Query: 444 agatccaagtaccatgagacgattgtcaagcatgagaatgagatcccaagaacagagact 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2006 agatccaagtaccatgagacgattgtcaagcatgagaatgagatcccaagaacagagact 1947 Query: 504 cctactcctgtgcgcagagaaaagccttcagaacaaccaaaggatgaaaacgtaccgttt 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1946 cctactcctgtgcgcagagaaaagccttcagaacaaccaaaggatgaaaacgtaccgttt 1887 Query: 564 gttgatcagatactgcccagcgatgaagagaacgaggaagacgaagattatatttacgat 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1886 gttgatcagatactgcccagcgatgaagagaacgaggaagacgaagattatatttacgat 1827 Query: 624 gaggaattgaaacagacgttcaatagaaccgtagaagacatttacattgacgatatctcg 683 ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1826 gaggaattgaacaagacgttcaatagaaccgtagaagacattacaattgacgatatctcg 1767 Query: 684 agacatttggaaacgttagacatttattacagcg-aagaagaccaagaggaccaggagc- 741 |||||||||||||||||||||| |||| |||| |||||||| ||||||| ||||||| Sbjct: 1766 agacatttggaaacgttagaca-ttatacaagcgaaagaagacgaagaggaacaggagca 1708 Query: 742 agaacatcatggcgac-acggtcaaagtcatcgtgcacgtaccagatttcccgtcaacag 800 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1707 agaacatcatggcgacaacggtcaaagtcatcgtgcacgtaccagagttcccgtcaacag 1648 Query: 801 ccatcaaagaaacagcagaaacgtctcttgattccagc-attccttcttgacgcaggaaa 859 |||||| |||||||||||||||||||| ||| |||||| |||||| || ||||||||||| Sbjct: 1647 ccatcagagaaacagcagaaacgtctc-tgaatccagcaattcctcctcgacgcaggaaa 1589 Query: 860 ccggattcaccttaggcgggtacaaga 886 | |||| || | ||||||||||||||| Sbjct: 1588 cgggatccaacgtaggcgggtacaaga 1562 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5958 Number of Sequences: 1807 Number of extensions: 5958 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)