BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC43ZD09RM1.SCF screened BAC_end
         (947 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1485                                                        1481   0.0  

>3x_Contig1485 
          Length = 9830

 Score = 1481 bits (747), Expect = 0.0
 Identities = 847/872 (97%), Gaps = 8/872 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   ttactttttcttgaagagactcaactaattggggacatgtgcgtgt-cgatattgtcgat 105
            |||| ||||||||||||| ||||||||||||| ||||||||||| | | |||||||||||
Sbjct: 8496 ttacattttcttgaagagtctcaactaattggtgacatgtgcgtttaccatattgtcgat 8555

                                                                        
Query: 106  tggctccagcaaaatttatctgagattatcgaaaatcctggtccgttactaacaaaagaa 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8556 tggctccagcaaaatttatctgagattatcgaaaatcctggtccgttactaacaaaagaa 8615

                                                                        
Query: 166  cgcattgaaatcacttctaataatttgatcaaaagcactaataaaaaaagaagattcaat 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8616 cgcattgaaatcacttctaataatttgatcaaaagcactaataaaaaaagaagattcaat 8675

                                                                        
Query: 226  gccagaacctctaaattgtcgaatcaagaggttt-cagagttggaagatgaatatagaaa 284
            |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8676 gccagagcctctaaattgtcgaatcaagaggttttcagagttggaagatgaatatagaaa 8735

                                                                        
Query: 285  gaggcagaaaagtaatgaattccatactatgagggaacagcgctcaaagctaccggcttg 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8736 gaggcagaaaagtaatgaattccatactatgagggaacagcgctcaaagctaccggcttg 8795

                                                                        
Query: 345  gaaaatacagaattctatcgtagagcttataaattctaatgatgttgttcttattacagg 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8796 gaaaatacagaattctatcgtagagcttataaattctaatgatgttgttcttattacagg 8855

                                                                        
Query: 405  tgaaactggttcgggtaaatcaacacaggtcgttcaatttgtccttgataatttaatgca 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8856 tgaaactggttcgggtaaatcaacacaggtcgttcaatttgtccttgataatttaatgca 8915

                                                                        
Query: 465  acatggcgatttgaacaagacgtccataatctgcacacagccaagaaggatatctgcaat 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8916 acatggcgatttgaacaagacgtccataatctgcacacagccaagaaggatatctgcaat 8975

                                                                        
Query: 525  tggtctagcggagcgtgtatcacaggaacggtgtgtcaaatgtggtgatgaagtagggta 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8976 tggtctagcggagcgtgtatcacaggaacggtgtgtcaaatgtggtgatgaagtagggta 9035

                                                                        
Query: 585  tattattagaggtgttaatctgacaaaaagtgctaccagaattaaattcatgacaactgg 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9036 tattattagaggtgttaatctgacaaaaagtgctaccagaattaaattcatgacaactgg 9095

                                                                        
Query: 645  tgttcttgttcgtattctacaaggagatgtcactttcttgaatgactgcgtggttgntat 704
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 9096 tgttcttgttcgtattctacaaggagatgtcactttcttgaatgactgcgtggttgttat 9155

                                                                        
Query: 705  cgatgaagttcacgaaaggtccatagatacagatttaat-attatnctattgaagaattt 763
            ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 9156 cgatgaagttcacgaaaggtccatagatacagatttaataattatcctattgaagaattt 9215

                                                                        
Query: 764  atttgagaaagtcaaaggaatgaattaaattcttatgagtgccactgtaaatgttgatgt 823
            |||  ||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 9216 attgaagaaagtcaaaggaatgaaattaattcttatgagtgccactgtaaatgttgatgt 9275

                                                                        
Query: 824  tttcaaggcgttctt--aaaaattaaaatcaa-tcacattgaaggacgtacttttccga- 879
            |||||||||||||||  |||| |||||||||| ||||||||||||||||||||| |||| 
Sbjct: 9276 tttcaaggcgttcttcaaaaatttaaaatcaattcacattgaaggacgtactttcccgat 9335

                                            
Query: 880  tccagattatttc-taaatgatggactaaaag 910
            || |||||||||| || |||||| ||||||||
Sbjct: 9336 tcaagattatttcttagatgatgtactaaaag 9367


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7755
Number of Sequences: 1807
Number of extensions: 7755
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)