BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZD09RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1485 1481 0.0 >3x_Contig1485 Length = 9830 Score = 1481 bits (747), Expect = 0.0 Identities = 847/872 (97%), Gaps = 8/872 (0%) Strand = Plus / Plus Query: 47 ttactttttcttgaagagactcaactaattggggacatgtgcgtgt-cgatattgtcgat 105 |||| ||||||||||||| ||||||||||||| ||||||||||| | | ||||||||||| Sbjct: 8496 ttacattttcttgaagagtctcaactaattggtgacatgtgcgtttaccatattgtcgat 8555 Query: 106 tggctccagcaaaatttatctgagattatcgaaaatcctggtccgttactaacaaaagaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8556 tggctccagcaaaatttatctgagattatcgaaaatcctggtccgttactaacaaaagaa 8615 Query: 166 cgcattgaaatcacttctaataatttgatcaaaagcactaataaaaaaagaagattcaat 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8616 cgcattgaaatcacttctaataatttgatcaaaagcactaataaaaaaagaagattcaat 8675 Query: 226 gccagaacctctaaattgtcgaatcaagaggttt-cagagttggaagatgaatatagaaa 284 |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 8676 gccagagcctctaaattgtcgaatcaagaggttttcagagttggaagatgaatatagaaa 8735 Query: 285 gaggcagaaaagtaatgaattccatactatgagggaacagcgctcaaagctaccggcttg 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8736 gaggcagaaaagtaatgaattccatactatgagggaacagcgctcaaagctaccggcttg 8795 Query: 345 gaaaatacagaattctatcgtagagcttataaattctaatgatgttgttcttattacagg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8796 gaaaatacagaattctatcgtagagcttataaattctaatgatgttgttcttattacagg 8855 Query: 405 tgaaactggttcgggtaaatcaacacaggtcgttcaatttgtccttgataatttaatgca 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8856 tgaaactggttcgggtaaatcaacacaggtcgttcaatttgtccttgataatttaatgca 8915 Query: 465 acatggcgatttgaacaagacgtccataatctgcacacagccaagaaggatatctgcaat 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8916 acatggcgatttgaacaagacgtccataatctgcacacagccaagaaggatatctgcaat 8975 Query: 525 tggtctagcggagcgtgtatcacaggaacggtgtgtcaaatgtggtgatgaagtagggta 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8976 tggtctagcggagcgtgtatcacaggaacggtgtgtcaaatgtggtgatgaagtagggta 9035 Query: 585 tattattagaggtgttaatctgacaaaaagtgctaccagaattaaattcatgacaactgg 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9036 tattattagaggtgttaatctgacaaaaagtgctaccagaattaaattcatgacaactgg 9095 Query: 645 tgttcttgttcgtattctacaaggagatgtcactttcttgaatgactgcgtggttgntat 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9096 tgttcttgttcgtattctacaaggagatgtcactttcttgaatgactgcgtggttgttat 9155 Query: 705 cgatgaagttcacgaaaggtccatagatacagatttaat-attatnctattgaagaattt 763 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 9156 cgatgaagttcacgaaaggtccatagatacagatttaataattatcctattgaagaattt 9215 Query: 764 atttgagaaagtcaaaggaatgaattaaattcttatgagtgccactgtaaatgttgatgt 823 ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 9216 attgaagaaagtcaaaggaatgaaattaattcttatgagtgccactgtaaatgttgatgt 9275 Query: 824 tttcaaggcgttctt--aaaaattaaaatcaa-tcacattgaaggacgtacttttccga- 879 ||||||||||||||| |||| |||||||||| ||||||||||||||||||||| |||| Sbjct: 9276 tttcaaggcgttcttcaaaaatttaaaatcaattcacattgaaggacgtactttcccgat 9335 Query: 880 tccagattatttc-taaatgatggactaaaag 910 || |||||||||| || |||||| |||||||| Sbjct: 9336 tcaagattatttcttagatgatgtactaaaag 9367 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7755 Number of Sequences: 1807 Number of extensions: 7755 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)