BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZD10RM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1030 1423 0.0 >3x_Contig1030 Length = 5200 Score = 1423 bits (718), Expect = 0.0 Identities = 738/744 (99%), Gaps = 1/744 (0%) Strand = Plus / Minus Query: 52 ctgatcctgaatcttaatcggctaataaaaatataaacgtatttgtaacaggtgttactg 111 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1287 ctgatcctgaatctttatcggctaagaaaaatataaacgtatttgtaacaggtgttactg 1228 Query: 112 gattcttgggatcctacatcctagcagacctcctcaatcgcccgacctcttcctacaata 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1227 gattcttgggatcctacatcctagcagacctcctcaatcgcccgacctcttcctacaata 1168 Query: 172 ttaaggtttttgcccatgtcagagctaaaactgaggctgctggttttaacaggttaaaac 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1167 ttaaggtttttgcccatgtcagagctaaaactgaggctgctggttttaacaggttaaaac 1108 Query: 232 aagctggtataacttatggtacttggtcagattctttcataaatagaattgaggttgtgt 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1107 aagctggtataacttatggtacttggtcagattctttcataaatagaattgaggttgtgt 1048 Query: 292 taggtgacctttctaaggagaagttcggtttgccagaaggcacttggagcaacttggtca 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1047 taggtgacctttctaaggagaagttcggtttgccagaaggcacttggagcaacttggtca 988 Query: 352 acgaaattgacgttatcattcacaacggtgccttggttcattgggtatatccgtactcaa 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 acgaaattgacgttatcattcacaacggtgccttggttcattgggtatatccgtactcaa 928 Query: 412 agctcagagaccctaatgttgttgcaactgtcaatgttatgtctcttgccgcttcaggta 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 agctcagagaccctaatgttgttgcaactgtcaatgttatgtctcttgccgcttcaggta 868 Query: 472 aggccaaatactttacgtttgtttcctctacttccacaattgataccgaacattactttt 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 867 aggccaaatactttacgtttgtttcctctacttccacaattgataccgaacattactttt 808 Query: 532 cattatctgataagttagtgtcggagggaaagtctggtatcctagaagctgacgacttat 591 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 807 cattatctgataagttagtgtcggagggaaagtctggtatcctagaagct-acgacttat 749 Query: 592 cangatctgctgtcgggttaactagtggatatggtcaatcttaatgggccgccgaatata 651 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 748 caggatctgctgtcgggttaactagtggatatggtcaatctaaatgggccgccgaatata 689 Query: 652 tcataagaagagcgggggagcgtggtcttcgcggctgcattgttagaccangttatgtta 711 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 688 tcataagaagagcgggggagcgtggtcttcgcggctgcattgttagaccaggttatgtta 629 Query: 712 ccggtgcctcatccaatgggtcgtccaatactgatgatttcttgttaagattcttaaagg 771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 ccggtgcctcatccaatgggtcgtccaatactgatgatttcttgttaagattcttaaagg 569 Query: 772 gggtggtacagttgggtcaaatcc 795 |||||||||||||||||||||||| Sbjct: 568 gggtggtacagttgggtcaaatcc 545 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5128 Number of Sequences: 1807 Number of extensions: 5128 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)