BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZE05FM1.SCF screened BAC_end (880 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig775 1096 0.0 >3x_Contig775 Length = 2633 Score = 1096 bits (553), Expect = 0.0 Identities = 638/654 (97%), Gaps = 10/654 (1%) Strand = Plus / Plus Query: 86 agttgtctaggcaaacgcaataaagcactgttcaatacagtttcataaactgtcaacgtc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 agttgtctaggcaaacgcaataaagcactgttcaatacagtttcataaactgtcaacgtc 873 Query: 146 ggtaacaagtagtcctcttggtcgacaaatccgataatcttagaatatttatccttatcg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 ggtaacaagtagtcctcttggtcgacaaatccgataatcttagaatatttatccttatcg 933 Query: 206 atatctacaccgttaacctttattgagccggtaactttaccagttttgttcttcatggca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 atatctacaccgttaacctttattgagccggtaactttaccagttttgttcttcatggca 993 Query: 266 aggatatcaagcaaagtagttttaccagcgcctgaaccgcccataatggctaacatctca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 994 aggatatcaagcaaagtagttttaccagcgcctgaaccgcccataatggctaacatctca 1053 Query: 326 ccaggtttaacagatcctgtgacttcattcaatacgtcagcagtcacattcttagcagga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ccaggtttaacagatcctgtgacttcattcaatacgtcagcagtcacattcttagcagga 1113 Query: 386 gacacctcataagtgatattttcaaaagtcaaagttgcacttgaatttgttttgaaaagg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 gacacctcataagtgatattttcaaaagtcaaagttgcacttgaatttgttttgaaaagg 1173 Query: 446 tcaaaatcatcctcatcgtcaccatcagatagcttaattgggccattggaaaatataggg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1174 tcaaaatcatcctcatcgtcaccatcagatagcttaattgggccattggaaaatataggg 1233 Query: 506 cttttagaaatgaagtagatggcaatagacgcgacagcanatatcccccacag-actcan 564 ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| Sbjct: 1234 cttttagaaatgaagtagatggcaatagacgcgacagcaaatat-ccccacagaactcaa 1292 Query: 565 aacaagaactagaatggatgacgttgancaacggtctttatctggaattttgtagcccgg 624 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1293 aacaagaactagaatggatgacgttgacaaacggtctttatctggaattttgtagcccgg 1352 Query: 625 aatctcactgttatgaacaca-tcaccaga-tcacatttc-acgtaatgtaaggatcttc 681 ||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||||| | Sbjct: 1353 aatctcactgtaatgaacacattcaccagattcacatttcaacgtaatgtaaggatctcc 1412 Query: 682 -aatacagttagga-taaatcattc-tgcta-gttccgaaaa-ttacatttttt 730 ||||||||||||| |||||||||| ||||| |||||||||| ||||||||||| Sbjct: 1413 aaatacagttaggattaaatcattcatgctaggttccgaaaatttacatttttt 1466 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6152 Number of Sequences: 1807 Number of extensions: 6152 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 880 length of database: 10,358,551 effective HSP length: 16 effective length of query: 864 effective length of database: 10,329,639 effective search space: 8924808096 effective search space used: 8924808096 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)