BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZE10FM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1684 967 0.0 >3x_Contig1684 Length = 14609 Score = 967 bits (488), Expect = 0.0 Identities = 584/607 (96%), Gaps = 7/607 (1%) Strand = Plus / Plus Query: 86 acccaccattgaggccttttgtatcaactcctgtcattgctattacaaagatctttaacc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9656 acccaccattgaggccttttgtatcaactcctgtcattgctattacaaagatctttaacc 9715 Query: 146 aagggagcagacgcaaatatgagttgttactgttaccctcatagcgctcacgtcaagatt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9716 aagggagcagacgcaaatatgagttgttactgttaccctcatagcgctcacgtcaagatt 9775 Query: 206 cgcgttttaatatgcataatgtcaatatagatcttaaacgtaaacaacatacatcacatc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9776 cgcgttttaatatgcataatgtcaatatagatcttaaacgtaaacaacatacatcacatc 9835 Query: 266 gcataacacaggcaatagtacgctccccatctggtatcaaagcatttacttcagtggaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9836 gcataacacaggcaatagtacgctccccatctggtatcaaagcatttacttcagtggaaa 9895 Query: 326 agagcgacaaagtacaaataaatgaatcattatgtcaataaacctttcaaacgtccacgc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9896 agagcgacaaagtacaaataaatgaatcattatgtcaataaacctttcaaacgtccacgc 9955 Query: 386 atggtangtagacctggaagagataccctttctgagcagatacacaccggccttcggcca 445 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9956 atggtaggtagacctggaagagataccctttctgagcagatacacaccggccttcggcca 10015 Query: 446 aagtctcatcattcacatactaaaattaccaataccagctctgaaactgtgaaactaacg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10016 aagtctcatcattcacatactaaaattaccaataccagctctgaaactgtgaaactaacg 10075 Query: 506 tatgccggccc-aaaagtttgaaaaccagcgtaaatgcaccagttggtgtgtctaagtca 564 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10076 tatgccggcccaaaaagtttgaaaaccagcgtaaatgcaccagttggtgtgtctaagtca 10135 Query: 565 tcacaaggggttttctttattttacag-aaattacagagaggtttcacat-agaagaacc 622 |||| ||| | |||||||| ||||||| |||||||||| |||| || || |||||||| Sbjct: 10136 tcac-aggaggtttcttta-tttacagcaaattacagaagggttacaaataagaagaaca 10193 Query: 623 agactggggatggtgaatggataccccaatttgaaaagccacaattaatttgaagtttta 682 |||| ||||||||| |||||||| ||||| ||| |||| || | ||| ||||||||||| Sbjct: 10194 agacgtgggatggtg-atggatacgccaatatgacaagcgacga-taaattgaagtttta 10251 Query: 683 caacgaa 689 ||||||| Sbjct: 10252 caacgaa 10258 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7214 Number of Sequences: 1807 Number of extensions: 7214 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)