BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZE10RM1.SCF screened BAC_end (903 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1259 864 0.0 >3x_Contig1259 Length = 4915 Score = 864 bits (436), Expect = 0.0 Identities = 474/484 (97%), Gaps = 2/484 (0%) Strand = Plus / Plus Query: 48 aatcaacgtgtcggcccaatctgctctgtaagataacaacacccaaatccgataacggct 107 |||||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||| Sbjct: 2294 aatcaaggtgtcggcccagtatgctctgtaagataacaa-acccaaatccgataacggct 2352 Query: 108 tttctggtgatccgactttaccctctttcttagataactcataagaaaactcgattaata 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2353 tttctggtgatccgactttaccctctttcttagataactcataagaaaactcgattaata 2412 Query: 168 gtctaccgtaacccattctttgatattgaggtagtgttaaaatacatgccacattataag 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2413 gtctaccgtaacccattctttgatattgaggtagtgttaaaatacatgccacattataag 2472 Query: 228 catcagctgattccttttcctttgagaaataaccgacaatatgatggcctagttcatcac 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2473 catcagctgattccttttcctttgagaaataaccgacaatatgatggcctagttcatcac 2532 Query: 288 gcctagtcatacagtaaaataaaaatggatcaacatcatagtacaacgttttatgatcca 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2533 gcctagtcatacagtaaaataaaaatggatcaacatcatagtacaacgttttatgatcca 2592 Query: 348 agaaaagtttagacaaaagacatagattacggcaccatgtcctctgtttccgaccatcaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2593 agaaaagtttagacaaaagacatagattacggcaccatgtcctctgtttccgaccatcaa 2652 Query: 408 tttcaaagaaggaaacatagtcatctctatatatctcgttacctggaggatgtcgtagag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2653 tttcaaagaaggaaacatagtcatctctatatatctcgttacctggaggatgtcgtagag 2712 Query: 468 tacatttctttctggatcgttcataatggttctttgaatccgaattattggagggaaaaa 527 |||||||||||||| |||||||||| || ||||||| ||||||| ||||| ||||||||| Sbjct: 2713 tacatttctttctgtatcgttcatattgtttctttg-atccgaaatattgtagggaaaaa 2771 Query: 528 tcat 531 |||| Sbjct: 2772 tcat 2775 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 17,434 Number of Sequences: 1807 Number of extensions: 17434 Number of successful extensions: 178 Number of sequences better than 1.0e-20: 1 length of query: 903 length of database: 10,358,551 effective HSP length: 16 effective length of query: 887 effective length of database: 10,329,639 effective search space: 9162389793 effective search space used: 9162389793 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)