BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZF01RM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1315 1400 0.0 >3x_Contig1315 Length = 8846 Score = 1400 bits (706), Expect = 0.0 Identities = 767/778 (98%), Gaps = 7/778 (0%) Strand = Plus / Minus Query: 48 tgatcattaggatttgacttatatacatttctactacgcgaaaggaattattaaaggtaa 107 |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4940 tgatcatttggatttgacttatatacatctctactacgcgaaaggaattattaaaggtaa 4881 Query: 108 aatacacgcataaacaaaaacaatggcatctagtactgctgcagctggtatgacttcttc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4880 aatacacgcataaacaaaaacaatggcatctagtactgctgcagctggtatgacttcttc 4821 Query: 168 ttctgatgggttggctttggtaaatccatcttcttatgttgggtttgattcgattacttc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 ttctgatgggttggctttggtaaatccatcttcttatgttgggtttgattcgattacttc 4761 Query: 228 acagattgaacatcgtttgttgaagagaggatttcaattcaacgttatggtcgttggaca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4760 acagattgaacatcgtttgttgaagagaggatttcaattcaacgttatggtcgttggaca 4701 Query: 288 ttctggtctgggtaagagtactttgatcaacactttgtttgcatctcacttggttgattc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 ttctggtctgggtaagagtactttgatcaacactttgtttgcatctcacttggttgattc 4641 Query: 348 ttctactggtaaggacatcactcaggaaccaattagtaagaccaccgagatcaaggtttc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 ttctactggtaaggacatcactcaggaaccaattagtaagaccaccgagatcaaggtttc 4581 Query: 408 aacacattctttattggaagaccgtgtacgtttgaacgtgaacgtgattgacactccagg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4580 aacacattctttattggaagaccgtgtacgtttgaacgtgaacgtgattgacactccagg 4521 Query: 468 ttttggtgaccagataaataacgacaaagtttgggaacctattgtcaagtacatcaagga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4520 ttttggtgaccagataaataacgacaaagtttgggaacctattgtcaagtacatcaagga 4461 Query: 528 gcaacactctcaatatttacgtaaagagttgactgctcaacgtgaaagacacattgtaga 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4460 gcaacactctcaatatttacgtaaagagttgactgctcaacgtgaaagacacattgtaga 4401 Query: 588 cactcgagtacatgcagtgttatatttcatccaacctaacggtaagggtctaacagaact 647 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4400 cactcgagtacatgcagtgttatatttcatccaa-ctaacggtaagggtctaacagaact 4342 Query: 648 tgacgttgctgctttgaagagattgacagaaatcgctaatgttatcccggtgatcgctaa 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4341 tgacgttgctgctttgaagagattgacagaaatcgctaatgttatcccggtgatcgctaa 4282 Query: 708 agctgatactttgacgttgaatgagagagctaacttcagaaacatctttacaggaagaat 767 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 4281 agctgatactttgacgttgaatgagagagctaacttcagaaacatc-ttacaagaagaat 4223 Query: 768 ttaaaaagtaccattttcagaaatctattccatatgattttagacgattctgaccgat 825 |||||||||| || |||||| |||||| ||||||||| ||||||||| |||||||||| Sbjct: 4222 ttaaaaagta-caatttcag-aatcta-tccatatga-tttagacga-tctgaccgat 4170 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7434 Number of Sequences: 1807 Number of extensions: 7434 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)