BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC43ZF01RM1.SCF screened BAC_end
         (917 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1315                                                        1400   0.0  

>3x_Contig1315 
          Length = 8846

 Score = 1400 bits (706), Expect = 0.0
 Identities = 767/778 (98%), Gaps = 7/778 (0%)
 Strand = Plus / Minus

                                                                        
Query: 48   tgatcattaggatttgacttatatacatttctactacgcgaaaggaattattaaaggtaa 107
            |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4940 tgatcatttggatttgacttatatacatctctactacgcgaaaggaattattaaaggtaa 4881

                                                                        
Query: 108  aatacacgcataaacaaaaacaatggcatctagtactgctgcagctggtatgacttcttc 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4880 aatacacgcataaacaaaaacaatggcatctagtactgctgcagctggtatgacttcttc 4821

                                                                        
Query: 168  ttctgatgggttggctttggtaaatccatcttcttatgttgggtttgattcgattacttc 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4820 ttctgatgggttggctttggtaaatccatcttcttatgttgggtttgattcgattacttc 4761

                                                                        
Query: 228  acagattgaacatcgtttgttgaagagaggatttcaattcaacgttatggtcgttggaca 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4760 acagattgaacatcgtttgttgaagagaggatttcaattcaacgttatggtcgttggaca 4701

                                                                        
Query: 288  ttctggtctgggtaagagtactttgatcaacactttgtttgcatctcacttggttgattc 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4700 ttctggtctgggtaagagtactttgatcaacactttgtttgcatctcacttggttgattc 4641

                                                                        
Query: 348  ttctactggtaaggacatcactcaggaaccaattagtaagaccaccgagatcaaggtttc 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4640 ttctactggtaaggacatcactcaggaaccaattagtaagaccaccgagatcaaggtttc 4581

                                                                        
Query: 408  aacacattctttattggaagaccgtgtacgtttgaacgtgaacgtgattgacactccagg 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4580 aacacattctttattggaagaccgtgtacgtttgaacgtgaacgtgattgacactccagg 4521

                                                                        
Query: 468  ttttggtgaccagataaataacgacaaagtttgggaacctattgtcaagtacatcaagga 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4520 ttttggtgaccagataaataacgacaaagtttgggaacctattgtcaagtacatcaagga 4461

                                                                        
Query: 528  gcaacactctcaatatttacgtaaagagttgactgctcaacgtgaaagacacattgtaga 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4460 gcaacactctcaatatttacgtaaagagttgactgctcaacgtgaaagacacattgtaga 4401

                                                                        
Query: 588  cactcgagtacatgcagtgttatatttcatccaacctaacggtaagggtctaacagaact 647
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4400 cactcgagtacatgcagtgttatatttcatccaa-ctaacggtaagggtctaacagaact 4342

                                                                        
Query: 648  tgacgttgctgctttgaagagattgacagaaatcgctaatgttatcccggtgatcgctaa 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4341 tgacgttgctgctttgaagagattgacagaaatcgctaatgttatcccggtgatcgctaa 4282

                                                                        
Query: 708  agctgatactttgacgttgaatgagagagctaacttcagaaacatctttacaggaagaat 767
            |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 4281 agctgatactttgacgttgaatgagagagctaacttcagaaacatc-ttacaagaagaat 4223

                                                                      
Query: 768  ttaaaaagtaccattttcagaaatctattccatatgattttagacgattctgaccgat 825
            |||||||||| || |||||| |||||| ||||||||| ||||||||| ||||||||||
Sbjct: 4222 ttaaaaagta-caatttcag-aatcta-tccatatga-tttagacga-tctgaccgat 4170


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7434
Number of Sequences: 1807
Number of extensions: 7434
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)