BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZF02FM1.SCF screened BAC_end (995 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1126 1106 0.0 >3x_Contig1126 Length = 5421 Score = 1106 bits (558), Expect = 0.0 Identities = 632/646 (97%), Gaps = 8/646 (1%) Strand = Plus / Plus Query: 87 aagatggtcggtgttcctcaagaaggtcaccattaagcattttaatccttccttccatat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 aagatggtcggtgttcctcaagaaggtcaccattaagcattttaatccttccttccatat 478 Query: 147 cattcccacttatcctggtaaaaaaaggattaacaaccagtgtaccactatatcattcta 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 cattcccacttatcctggtaaaaaaaggattaacaaccagtgtaccactatatcattcta 538 Query: 207 aaaattccaatacaaatgtcaaatacacaaacctattctaaaatattacaaaataataaa 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 aaaattccaatacaaatgtcaaatacacaaacctattctaaaatattacaaaataataaa 598 Query: 267 ttacacaagctgaagcaacaaattacacaaaaagtttagtggggacatatacttgaactg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 ttacacaagctgaagcaacaaattacacaaaaagtttagtggggacatatacttgaactg 658 Query: 327 gtcctgcacataatcaagatttgtttatatgtttggaaagcggggaacaggccagatcta 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 gtcctgcacataatcaagatttgtttatatgtttggaaagcggggaacaggccagatcta 718 Query: 387 ttgaattttaaaagaatgattgattcatattttataccaattgcctctatttctttcccc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 ttgaattttaaaagaatgattgattcatattttataccaattgcctctatttctttcccc 778 Query: 447 ccccggatcgtttaaaccaattaaagacttatgttacacattgtttctctacatactaca 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 ccccggatcgtttaaaccaattaaagacttatgttacacattgtttctctacatactaca 838 Query: 507 tttcacaggtaagaactcattatttaaattaagtacgattttatcaataaaattttcaaa 566 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 839 tttcacaggtaagaactcattatttaaattaagtacgattttatcaataaaatttcaaaa 898 Query: 567 aaaaaagtctttgtttcaaggtgacacccgagggtcagtatgacaattaccgatacagaa 626 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 899 aaaaaagtctttgtttcaaggtgaca-ccgagggtcagtatgacaattaccgatacagaa 957 Query: 627 gtaatttaccgaatattcaaaacactttattaattgccaaagcacctttttcagattata 686 |||| |||||||||||||||||||| ||| || ||| ||||||| | ||||||||||||| Sbjct: 958 gtaa-ttaccgaatattcaaaacac-ttagtagttg-caaagcaaccttttcagattata 1014 Query: 687 tgtaatatcatcttatgaaggggaaattacccccaatgatagatgg 732 ||| |||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 1015 tgt-atatcatc-tatgaagggg-aatta-ccccaatgatagatgg 1056 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9551 Number of Sequences: 1807 Number of extensions: 9551 Number of successful extensions: 75 Number of sequences better than 1.0e-20: 1 length of query: 995 length of database: 10,358,551 effective HSP length: 16 effective length of query: 979 effective length of database: 10,329,639 effective search space: 10112716581 effective search space used: 10112716581 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)