BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC43ZF02RM1.SCF screened BAC_end
         (954 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1733                                                        1631   0.0  

>3x_Contig1733 
          Length = 18615

 Score = 1631 bits (823), Expect = 0.0
 Identities = 885/898 (98%), Gaps = 6/898 (0%)
 Strand = Plus / Minus

                                                                         
Query: 48    accgccatcttcagacttgtcagaatcacccaagtaaaaggcaaacactgggtcatccaa 107
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17849 accgccatcttcagacttgtcagaatcacccaagtaaaaggcaaacactgggtcatccaa 17790

                                                                         
Query: 108   aagtttgtttttgatagcgttgtacactggtggaacgattctgttaacagagatggagtc 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17789 aagtttgtttttgatagcgttgtacactggtggaacgattctgttaacagagatggagtc 17730

                                                                         
Query: 168   gtaagccaaccccaaaataccatcgaatttaccaaaggcaaatgccaaacctggttcgct 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17729 gtaagccaaccccaaaataccatcgaatttaccaaaggcaaatgccaaacctggttcgct 17670

                                                                         
Query: 228   ggtagcttcagcgaaatcctggtcaggtatcactaaatccccaatggtcaacaaatcacg 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17669 ggtagcttcagcgaaatcctggtcaggtatcactaaatccccaatggtcaacaaatcacg 17610

                                                                         
Query: 288   agacacatatccttcaagggaaccagaaccatattggatagcaaactcggaaccattagc 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17609 agacacatatccttcaagggaaccagaaccatattggatagcaaactcggaaccattagc 17550

                                                                         
Query: 348   tttgtaagtgctagaagcctcatggtcatatttggtgtgcaagaaacatgccaaagaacc 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17549 tttgtaagtgctagaagcctcatggtcatatttggtgtgcaagaaacatgccaaagaacc 17490

                                                                         
Query: 408   acattctgcacttggaacccacaagtttgatgaaccagtgtctaagataaccttaaaaga 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17489 acattctgcacttggaacccacaagtttgatgaaccagtgtctaagataaccttaaaaga 17430

                                                                         
Query: 468   ctgtggtggcgaacccaaagtaatttctgtgaaatactgagcattcaagtaattggtcaa 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17429 ctgtggtggcgaacccaaagtaatttctgtgaaatactgagcattcaagtaattggtcaa 17370

                                                                         
Query: 528   tgggacactgtgagacccttctggggcaacgaaaacatcaacgttatccttagagaaaga 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17369 tgggacactgtgagacccttctggggcaacgaaaacatcaacgttatccttagagaaaga 17310

                                                                         
Query: 588   ttcttgagggtaagctctttggaagctatttaagtacttttcacctagttgagccacatg 647
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17309 ttcttgagggtaagctctttggaagctatttaagtacttttcacctagttgagccacatg 17250

                                                                         
Query: 648   ttcggcaaatggaacatccttcaattggtcttccaatttatgtttttgaattttggcctt 707
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17249 ttcggcaaatggaacatccttcaattggtcttccaatttatgtttttgaattttggcctt 17190

                                                                         
Query: 708   atgaatcttggctttcagc-acatcaaaagaagccaattacaatgaagctagaggcaaaa 766
             |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 17189 atgaatcttggc-ttcagcaacatcaaaagaagccaataacaatgaagctagaggcaaaa 17131

                                                                         
Query: 767   gaagattggaaattcaaatgcatgcttatttttntgttgtaagaaagcaccgtttattg- 825
             | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || 
Sbjct: 17130 g-agattggaaattcaaatgcatgcttatttttttgttgtaagaaagcaccgtttaatga 17072

                                                                         
Query: 826   acagttagcggcacattttcagaaaaattttgggggaaactgtatattagatttaatcaa 885
             ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 17071 acagttagcggcacaatttcagaaaaattttgggggaaactgtataatagatttaatcaa 17012

                                                                       
Query: 886   gttcctcttcgttc-aaatactgacactactatatatcttgaccgtttaccctgtctt 942
             |||||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 17011 gttcctctccgttcaaaatactgacactactatatatc-tgaccgtctaccctgtctt 16955


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6881
Number of Sequences: 1807
Number of extensions: 6881
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 954
length of database: 10,358,551
effective HSP length: 16
effective length of query: 938
effective length of database: 10,329,639
effective search space: 9689201382
effective search space used: 9689201382
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)