BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZF02RM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1733 1631 0.0 >3x_Contig1733 Length = 18615 Score = 1631 bits (823), Expect = 0.0 Identities = 885/898 (98%), Gaps = 6/898 (0%) Strand = Plus / Minus Query: 48 accgccatcttcagacttgtcagaatcacccaagtaaaaggcaaacactgggtcatccaa 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17849 accgccatcttcagacttgtcagaatcacccaagtaaaaggcaaacactgggtcatccaa 17790 Query: 108 aagtttgtttttgatagcgttgtacactggtggaacgattctgttaacagagatggagtc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17789 aagtttgtttttgatagcgttgtacactggtggaacgattctgttaacagagatggagtc 17730 Query: 168 gtaagccaaccccaaaataccatcgaatttaccaaaggcaaatgccaaacctggttcgct 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17729 gtaagccaaccccaaaataccatcgaatttaccaaaggcaaatgccaaacctggttcgct 17670 Query: 228 ggtagcttcagcgaaatcctggtcaggtatcactaaatccccaatggtcaacaaatcacg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17669 ggtagcttcagcgaaatcctggtcaggtatcactaaatccccaatggtcaacaaatcacg 17610 Query: 288 agacacatatccttcaagggaaccagaaccatattggatagcaaactcggaaccattagc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17609 agacacatatccttcaagggaaccagaaccatattggatagcaaactcggaaccattagc 17550 Query: 348 tttgtaagtgctagaagcctcatggtcatatttggtgtgcaagaaacatgccaaagaacc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17549 tttgtaagtgctagaagcctcatggtcatatttggtgtgcaagaaacatgccaaagaacc 17490 Query: 408 acattctgcacttggaacccacaagtttgatgaaccagtgtctaagataaccttaaaaga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17489 acattctgcacttggaacccacaagtttgatgaaccagtgtctaagataaccttaaaaga 17430 Query: 468 ctgtggtggcgaacccaaagtaatttctgtgaaatactgagcattcaagtaattggtcaa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17429 ctgtggtggcgaacccaaagtaatttctgtgaaatactgagcattcaagtaattggtcaa 17370 Query: 528 tgggacactgtgagacccttctggggcaacgaaaacatcaacgttatccttagagaaaga 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17369 tgggacactgtgagacccttctggggcaacgaaaacatcaacgttatccttagagaaaga 17310 Query: 588 ttcttgagggtaagctctttggaagctatttaagtacttttcacctagttgagccacatg 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17309 ttcttgagggtaagctctttggaagctatttaagtacttttcacctagttgagccacatg 17250 Query: 648 ttcggcaaatggaacatccttcaattggtcttccaatttatgtttttgaattttggcctt 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17249 ttcggcaaatggaacatccttcaattggtcttccaatttatgtttttgaattttggcctt 17190 Query: 708 atgaatcttggctttcagc-acatcaaaagaagccaattacaatgaagctagaggcaaaa 766 |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 17189 atgaatcttggc-ttcagcaacatcaaaagaagccaataacaatgaagctagaggcaaaa 17131 Query: 767 gaagattggaaattcaaatgcatgcttatttttntgttgtaagaaagcaccgtttattg- 825 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 17130 g-agattggaaattcaaatgcatgcttatttttttgttgtaagaaagcaccgtttaatga 17072 Query: 826 acagttagcggcacattttcagaaaaattttgggggaaactgtatattagatttaatcaa 885 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 17071 acagttagcggcacaatttcagaaaaattttgggggaaactgtataatagatttaatcaa 17012 Query: 886 gttcctcttcgttc-aaatactgacactactatatatcttgaccgtttaccctgtctt 942 |||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 17011 gttcctctccgttcaaaatactgacactactatatatc-tgaccgtctaccctgtctt 16955 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6881 Number of Sequences: 1807 Number of extensions: 6881 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)