BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZF03FM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1682 1181 0.0 >3x_Contig1682 Length = 16889 Score = 1181 bits (596), Expect = 0.0 Identities = 660/673 (98%), Gaps = 7/673 (1%) Strand = Plus / Plus Query: 87 tgtaaaatattagccggagtgaaggacatagcaacttcgagcaaaccacaaacacaggcg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7365 tgtaaaatattagccggagtgaaggacatagcaacttcgagcaaaccacaaacacaggcg 7424 Query: 147 gtacccaagatagcaccatagccatcaggacaagctaattgcgtgccatcttcggacact 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7425 gtacccaagatagcaccatagccatcaggacaagctaattgcgtgccatcttcggacact 7484 Query: 207 gggcaaaatcctgtatcatacatcatggggaaaacatttccgaccaaagtaatactagcg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7485 gggcaaaatcctgtatcatacatcatggggaaaacatttccgaccaaagtaatactagcg 7544 Query: 267 aatgaagtacctagcacagaaataagaccagaacccacgtagtatgaagtaaatgggata 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7545 aatgaagtacctagcacagaaataagaccagaacccacgtagtatgaagtaaatgggata 7604 Query: 327 gggactcttgtaatttgtatggctgacatgagactagaaacgatcaacgaagctgaaacc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7605 gggactcttgtaatttgtatggctgacatgagactagaaacgatcaacgaagctgaaacc 7664 Query: 387 aaatattcttgaacactctgatcgaggtttatcattgttgatatcaaaattggaggcgaa 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7665 aaatattcttgaacactctgatcgaggtttatcattgttgatatcaaaattggaggcgaa 7724 Query: 447 atgacaccagccaacatagacaacgagtgttgcaacccaagaatcatacctagtacaacg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7725 atgacaccagccaacatagacaacgagtgttgcaacccaagaatcatacctagtacaacg 7784 Query: 507 ggaacgtcagcattaagtgagaaaaacggttgatctctatgaacaagttcgacacctctt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7785 ggaacgtcagcattaagtgagaaaaacggttgatctctatgaacaagttcgacacctctt 7844 Query: 567 ttccttgctaaatactcttggaatggatacgaaagagngaaaaggaaagcgtaatcatag 626 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 7845 ttccttgctaaatactcttggaatggatacgaaggagtgaaaaggaaagcgtaatcatag 7904 Query: 627 tcacctagaagaacatncttggtagtccatttttctaaccactttttttcacaacatnct 686 |||||||||||| ||| |||||||||||| |||||||||||| |||||||||||||| | Sbjct: 7905 tcacctagaagaccatccttggtagtcca-ttttctaaccac-ttttttcacaacatcc- 7961 Query: 687 ttcacaaggtgctctttttcacattgtcctggctctacagcatcggccaaaaacttgatt 746 ||||| |||||||| ||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 7962 ttcac-aggtgctc-ttttcacattgtcct-gctctacagcatcggcc-aaaacttgatc 8017 Query: 747 catctttggggtt 759 ||||||||||||| Sbjct: 8018 catctttggggtt 8030 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6243 Number of Sequences: 1807 Number of extensions: 6243 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)