BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC43ZF05RM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1198 1463 0.0 >3x_Contig1198 Length = 5263 Score = 1463 bits (738), Expect = 0.0 Identities = 806/820 (98%), Gaps = 7/820 (0%) Strand = Plus / Plus Query: 48 ttatgaattttattggtaatctggactcagcagagttatcaaatattctacagacccttt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103 ttatgaattttattggtaatctggactcagcagagttatcaaatattctacagacccttt 162 Query: 108 taacgcgttggtcaactctcgtcgattcatcattcggaaataagaacatatcacacctga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 taacgcgttggtcaactctcgtcgattcatcattcggaaataagaacatatcacacctga 222 Query: 168 tcgaaaaactacttcaaaatcacatcgatattttgcctgtgctattcgctgaagaggatt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 tcgaaaaactacttcaaaatcacatcgatattttgcctgtgctattcgctgaagaggatt 282 Query: 228 tttttgaagagtctaacattgttcgttcgatagtggttcacttgacagccgatgttaatt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 tttttgaagagtctaacattgttcgttcgatagtggttcacttgacagccgatgttaatt 342 Query: 288 ctaaccttcatctgaagtatttattggaaattccaattcaatgtttgaataaggctgtaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 ctaaccttcatctgaagtatttattggaaattccaattcaatgtttgaataaggctgtaa 402 Query: 348 gattggcaatcctagaccaaataatagagaaggatgttttgaaagaggatgacataaatg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 gattggcaatcctagaccaaataatagagaaggatgttttgaaagaggatgacataaatg 462 Query: 408 ttctttgtcatgttttgaaaaaccctacctcgaggagcaaaatagaaaccgattataaaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 ttctttgtcatgttttgaaaaaccctacctcgaggagcaaaatagaaaccgattataaaa 522 Query: 468 caatgctcacgtttgtcggcaattcattcttcaaatatagcttggaaaatccggttattg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 caatgctcacgtttgtcggcaattcattcttcaaatatagcttggaaaatccggttattg 582 Query: 528 cagccgtttggcagagtgcactgcttcaaagaaacgacaacaaagcatcttcatccatgg 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 cagccgtttggcagagtgcactgcttcaaagaaacgacaacaaagcatcttcatccatgg 642 Query: 588 attctctattacaaagcattcangcaaatttgaatcatacctttgattataacacttatg 647 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 643 attctctattacaaagcattcaggcaaatttgaatcatacctttgattataacacttatg 702 Query: 648 ccttgttgcatctggtactc-aaacatgcgatgaatcagggttgcatttagatgctcttt 706 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 703 ccttgttgcatctggtactcaaaacatgcgatgaatcagggttgcatttagatgctctta 762 Query: 707 aagttaagntcatcaaatagtttgatttacaatattcagcatttcaacggagattt-aaa 765 | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 763 aggttaagttcatc-aatagtttgatttacaatattcagcatttcaacggagatttcaaa 821 Query: 766 ttacttgcatggctgttc-aggttttgttcattcaagc-agttactctaaaac-acaatt 822 ||||||||||||||| || ||||||||||||||||||| ||| |||||||||| |||||| Sbjct: 822 ttacttgcatggctgctcaaggttttgttcattcaagcaagtaactctaaaacaacaatt 881 Query: 823 cctgttccaccgttattttcgaa-gcattcgccattcctt 861 ||||||||||||||||||||||| |||| ||||||||||| Sbjct: 882 cctgttccaccgttattttcgaaggcatccgccattcctt 921 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7372 Number of Sequences: 1807 Number of extensions: 7372 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)